LOCUS BC014183 1478 bp mRNA linear HUM 16-MAR-2005
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 59, mRNA (cDNA
clone IMAGE:4622540), partial cds.
ACCESSION BC014183
VERSION BC014183.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1478)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1478)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014183.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13775231.
FEATURES Location/Qualifiers
source 1..1478
/db_xref="H-InvDB:HIT000088310"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4622540"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1478
/gene="DDX59"
/gene_synonym="DKFZP564B1023"
/gene_synonym="ZNHIT5"
/db_xref="GeneID:83479"
CDS 177..>1478
/gene="DDX59"
/gene_synonym="DKFZP564B1023"
/gene_synonym="ZNHIT5"
/codon_start=1
/product="DDX59 protein"
/protein_id="AAH14183.1"
/db_xref="GeneID:83479"
/translation="MFVPRSLKIKRNANDDGKSCVAKIIKPDPEDLQLDKSRDVPVDA
VATEAATIDRHISESCPFPSPGGQLAEVHSVSPEQGAKDSHPSEEPVKSFSKTQRWAE
PGEPICVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEKEEKSKLSNPQKADSEPES
PLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNL
KKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALI
LTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLL
DIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILVSATIPTSIE
QLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKKK"
BASE COUNT 433 a 340 c 358 g 347 t
ORIGIN
1 ctccgctccg ctccgctccg ctccgctccg ccccgcacca ccaaccccgg gccgcagtcc
61 tgacgagcgg gtcagggctt gtcgggcgga agcctggcct ggagcctgga agggggagac
121 ggcccgagcg ggagcgggag cggacgcggc ctcagtcctg cgcggaatat tgaaggatgt
181 ttgttccaag atctctaaaa atcaagagga atgctaatga tgatggcaaa agttgtgtgg
241 ctaagataat taaaccagac ccagaagacc ttcagttgga caaaagcaga gatgttcccg
301 ttgatgctgt agctacagaa gcagccacaa tagacaggca catcagcgaa tcatgccctt
361 tccccagccc aggtggccag ttggcagagg ttcattcagt aagtcccgag cagggtgcga
421 aggacagcca tccttctgaa gagcccgtta agtcattttc caaaacacag cgctgggcag
481 aaccagggga acccatctgt gttgtctgtg gtcgttatgg agagtatatc tgtgataaga
541 cagatgaaga tgtgtgtagt ttggagtgta aagcgaaaca tcttctacaa gttaaggaaa
601 aggaagagaa atcaaaactc agcaatccac agaaggctga ttctgagcca gagtctccac
661 tgaatgcttc ctatgtctac aaagagcacc cctttatttt gaaccttcag gaagaccaga
721 ttgaaaatct taaacagcag ctgggaattt tagttcaagg gcaagaagtc accaggccca
781 ttattgactt tgaacattgt agtctccctg aggtcttaaa tcacaacttg aagaaatcag
841 gctatgaggt gccaactccc attcaaatgc agatgattcc tgtgggactt ctgggaagag
901 acattctggc cagtgcagat actggctcag gaaaaacagc tgcttttctt cttcctgtta
961 tcatgcgagc tttattcgag agcaaaactc catctgcgct cattcttaca ccaaccagag
1021 agttagccat tcagatagag agacaagcta aagaattgat gagtggcctg ccacgcatga
1081 aaactgtgct tcttgtaggg ggcttaccct tacccccaca gctttatcgt ctgcaacaac
1141 atgttaaggt tatcatagca acccctgggc gacttctgga tataataaag cagagctctg
1201 tagaactctg tggtgtaaag attgtggtag tagatgaagc tgataccatg ttaaagatgg
1261 gttttcaaca acaagtgctt gacattttgg aaaacattcc taatgattgt cagaccattt
1321 tggtttcagc cacaattcca actagcatag aacagctagc aagccagctt ctgcataatc
1381 ctgtgagaat tatcactgga gaaaagaacc taccttgtgc caatgtacgt cagattattt
1441 tgtgggtaga agacccagcc aaaaaaaaaa aaaaaaaa
//