LOCUS BC014178 2842 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens carbamoyl-phosphate synthetase 2, aspartate
transcarbamylase, and dihydroorotase, mRNA (cDNA clone
IMAGE:4580779), partial cds.
ACCESSION BC014178
VERSION BC014178.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2842)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2842)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC014178.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: k Column: 10.
FEATURES Location/Qualifiers
source 1..2842
/db_xref="H-InvDB:HIT000036564"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4580779"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2842
/gene="CAD"
/db_xref="GeneID:790"
/db_xref="HGNC:HGNC:1424"
/db_xref="MIM:114010"
CDS <1..2557
/gene="CAD"
/codon_start=2
/product="CAD protein"
/protein_id="AAH14178.2"
/db_xref="GeneID:790"
/db_xref="HGNC:HGNC:1424"
/db_xref="MIM:114010"
/translation="PPQRSILEQLAEKNFELVINLSMRGAGGRRLSSFVTKGYRTRRL
AADFSVPLIIDIKCTKLFVEALGQIGPAPPLKVHVDCMTSQKLVRLPGLIDVHVHLRE
PGGTHKEDFASGTAAALAGGITMVCAMPNTRPPIIDAPALALAQKLAEAGARCDFALF
LGASSENAGTLGTVAGSAAGLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAE
QQTVAAVLMVAQLTQRSVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDL
ERLGPGKGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLE
TMLPLLLTAVSEGRLSLDDLLQRLHHNPRRIFHLPPQEDTYVEVDLEHEWTIPSHMPF
SKAHWTPFEGQKVKGTVRRVVLRGEVAYIDGQVLVPPGYGQDVRKWPQGAVPQLPPSA
PATSEMTTTPERPRRGIPGLPDGRFHLPPRIHRASDPGLPAEEPKEKSSRKVAEPELM
GTPDGTCYPPPPVPRQASPQNLGTPGLLHPQTSPLLHSLVGQHILSVQQFTKDQMSHL
FNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVLSFSEAT
SSVQKGESLADSVQTMSCYADVVVLRHPQPGAVELAAKHCRRPVINAGDGVGEHPTQA
LLDIFTIREELGTVNGMTITMVGDLKHGRTVHSLACLLTQYRVSLRYVAPPSLRMPPT
VRAFVASRGTKQEEFESIEEALPDTDVLYMTRIQKERFGSTQEYEACFGQFILTPHIM
TRAKKKMVVMHPMPRVNEISVEVDSDPRAAYFRQAENGMYIRMALLATVLGRF"
BASE COUNT 574 a 884 c 813 g 571 t
ORIGIN
1 cccaccacag cggagcatcc tggagcagct agctgagaaa aactttgagc tggtgattaa
61 cctgtcaatg cgtggagctg ggggccggcg tctctcttcc tttgtcacca agggctaccg
121 cacccgacgc ttggccgctg acttctccgt gcccctaatc atcgatatca agtgcaccaa
181 actctttgtg gaggccctag gccagatcgg gccagcccct cctttgaagg tgcatgttga
241 ctgtatgacc tcccaaaagc ttgtgcgact gccgggattg attgatgtcc atgtgcacct
301 gcgggaacca ggtgggacac ataaggagga ctttgcttca ggcacagccg ctgccctggc
361 tgggggtatc accatggtgt gtgccatgcc taatacccgg ccccccatca ttgacgcccc
421 tgctctggcc ctggcccaga agctggcaga ggctggcgcc cggtgcgact ttgcgctatt
481 ccttggggcc tcgtctgaaa atgcaggaac cttgggcacc gtggccgggt ctgcagccgg
541 gctgaagctt tacctcaatg agaccttctc tgagctgcgg ctggacagcg tggtccagtg
601 gatggagcat ttcgagacat ggccctccca cctccccatt gtggctcacg cggagcagca
661 aaccgtggct gctgtcctca tggtggctca gctcactcag cgctcagtgc acatatgtca
721 cgtggcacgg aaggaggaga tcctgctaat taaagctgca aaggcacggg gcttgccagt
781 gacctgcgag gtggctcccc accacctgtt cctaagccat gatgacctgg agcgcctggg
841 gcctgggaag ggggaggtcc ggcctgagct tggctcccgc caggatgtgg aagccctgtg
901 ggagaacatg gctgtcatcg actgctttgc ctcagaccat gctccccata ccttggagga
961 gaagtgtggg tccaggcccc cacctgggtt cccagggtta gagaccatgc tgccactact
1021 cctgacggct gtaagcgagg gccggctcag cctggacgac ctgctgcagc gattgcacca
1081 caatcctcgg cgcatctttc acctgcctcc gcaggaggac acctatgtgg aggtggatct
1141 ggagcatgag tggacaattc ccagccacat gcccttctcc aaggcccact ggacaccttt
1201 tgaagggcag aaagtgaagg gcaccgtccg ccgtgtggtc ctgcgagggg aggttgccta
1261 tatcgatggg caggttctgg tacccccggg ctatggacag gatgtacgga agtggccaca
1321 gggggctgtt cctcagctcc caccctcagc ccctgccact agtgagatga ccacgacacc
1381 tgaaagaccc cgccgtggca tcccagggct tcctgatggc cgcttccatc tgccgccccg
1441 aatccatcga gcctccgacc caggtttgcc agctgaggag ccaaaggaga agtcctctcg
1501 gaaggtagcc gagccagagc tgatgggaac ccctgatggc acctgctacc ctccaccacc
1561 agtaccgaga caggcatctc cccagaacct ggggacccct ggcttgctgc acccccagac
1621 ctcacccctg ctgcactcat tagtgggcca acatatcctg tccgtccagc agttcaccaa
1681 ggatcagatg tctcacctgt tcaatgtggc acacacactg cgtatgatgg tgcagaagga
1741 gcggagcctc gacatcctga aggggaaggt catggcctcc atgttctatg aagtgagcac
1801 acggaccagc agctcctttg cagcagccat ggcccggctg ggaggtgctg tgctcagctt
1861 ctcggaagcc acatcgtccg tccagaaggg cgaatccctg gctgactccg tgcagaccat
1921 gagctgctat gccgacgtcg tcgtgctccg gcacccccag cctggagcag tggagctggc
1981 cgccaagcac tgccggaggc cagtgatcaa tgctggggat ggggtcggag agcaccccac
2041 ccaggccctg ctggacatct tcaccatccg tgaggagctg ggaactgtca atggcatgac
2101 gatcacgatg gtgggtgacc tgaagcacgg acgcacagta cattccctgg cctgcctgct
2161 cacccagtat cgtgtcagcc tgcgctacgt ggcacctccc agcctgcgca tgccacccac
2221 tgtgcgggcc ttcgtggcct cccgcggcac caagcaggag gaattcgaga gcattgagga
2281 ggcgctgcct gacactgatg tgctctacat gactcgaatc cagaaggaac gatttggctc
2341 tacccaggag tacgaagctt gctttggtca gttcatcctc actccccaca tcatgacccg
2401 ggccaagaag aagatggtgg tgatgcaccc gatgccccgt gtcaacgaga taagcgtgga
2461 agtggactcg gatccccgcg cagcctactt ccgccaggct gagaacggca tgtacatccg
2521 catggctctg ttagccaccg tgctgggccg tttctagggc ctggcttcct cagcctcttc
2581 tctttaggcc cagctgctgg gcaaggaatt ccagtgcctc ctacgggggc agcacactta
2641 gatattcctg gacatccaga tagctcacat gtgctgacca cacttcaggc tctggactgg
2701 agctctctgg catgggggtg gggcctcaga tgctggggcc cagtctgccc catcttcatt
2761 cctgcacctt aaacctgtac agtcattttt ctactgactt aataaacagc cgagctgtcc
2821 cttgaaaaaa aaaaaaaaaa aa
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