LOCUS BC014129 2004 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens lysosomal protein transmembrane 4 beta, mRNA (cDNA
clone MGC:20748 IMAGE:4581284), complete cds.
ACCESSION BC014129
VERSION BC014129.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2004)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2004)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014129.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: k Column: 13.
FEATURES Location/Qualifiers
source 1..2004
/db_xref="H-InvDB:HIT000036534"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20748 IMAGE:4581284"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2004
/gene="LAPTM4B"
/gene_synonym="LAPTM4beta"
/gene_synonym="LC27"
/db_xref="GeneID:55353"
/db_xref="HGNC:HGNC:13646"
CDS 186..866
/gene="LAPTM4B"
/gene_synonym="LAPTM4beta"
/gene_synonym="LC27"
/codon_start=1
/product="LAPTM4B protein"
/protein_id="AAH14129.1"
/db_xref="GeneID:55353"
/db_xref="HGNC:HGNC:13646"
/translation="MKMVAPWTRFYSNSCCLCCHVRTGTILLGVWYLIINAVVLLILL
SALADPDQYNFSSSELGGDFEFMDDANMCIAIAISLLMILICAMATYGAYKQRAAWII
PFFCYQIFDFALNMLVAITVLIYPNSIQEYIRQLPPNFPYRDDVMSVNPTCLVLIILL
FISIILTFKGYLISCVWNCYRYINGRNSSDVLVYVTSNDTTVLLPPYDDATVNGAAKE
PPPPYVSA"
BASE COUNT 481 a 458 c 463 g 602 t
ORIGIN
1 gtaccgaccc ggcagaagct cggagctctc ggggtatcga ggaggcaggc ccgcgggcgc
61 acgggcgagc gggccgggag ccggagcggc ggaggagccg gcagcagcgg cgcggcgggc
121 tccaggcgag gcggtcgacg ctcctgaaaa cttgcgcgcg cgctcgcgcc actgcgcccg
181 gagcgatgaa gatggtcgcg ccctggacgc ggttctactc caacagctgc tgcttgtgct
241 gccatgtccg caccggcacc atcctgctcg gcgtctggta tctgatcatc aatgctgtgg
301 tactgttgat tttattgagt gccctggctg atccggatca gtataacttt tcaagttctg
361 aactgggagg tgactttgag ttcatggatg atgccaacat gtgcattgcc attgcgattt
421 ctcttctcat gatcctgata tgtgctatgg ctacttacgg agcgtacaag caacgcgcag
481 cctggatcat cccattcttc tgttaccaga tctttgactt tgccctgaac atgttggttg
541 caatcactgt gcttatttat ccaaactcca ttcaggaata catacggcaa ctgcctccta
601 attttcccta cagagatgat gtcatgtcag tgaatcctac ctgtttggtc cttattattc
661 ttctgtttat tagcattatc ttgactttta agggttactt gattagctgt gtttggaact
721 gctaccgata catcaatggt aggaactcct ctgatgtcct ggtttatgtt accagcaatg
781 acactacggt gctgctaccc ccgtatgatg atgccactgt gaatggtgct gccaaggagc
841 caccgccacc ttacgtgtct gcctaagcct tcaagtgggc ggagctgagg gcagcagctt
901 gactttgcag acatctgagc aatagttctg ttatttcact tttgccatga gcctctctga
961 gcttgtttgt tgctgaaatg ctacttttta aaatttagat gttagattga aaactgtagt
1021 tttcaacata tgctttgcta gaacactgtg atagattaac tgtagaattc ttcctgtacg
1081 attggggata taacgggctt cactaacctt ccctaggcat tgaaacttcc cccaaatctg
1141 atggacctag aagtctgctt ttgtacctgc tgggccccaa agttgggcat ttttctctct
1201 gttccctctc ttttgaaaat gtaaaataaa accaaaaata gacaactttt tcttcagcca
1261 ttccatcata gagaacaaaa ccttatggaa acaggaatgt caattgtgta atcattgttc
1321 taattaggta aatagaagtc cttatgtatg tgttacaaga atttccccca caacatcctt
1381 tatgactgaa gttcaatgac agtttgtgtt tggtggtaaa ggattttctc catggcctga
1441 attaagacca ttagaaagca ccaggccgtg ggagcagtga ccatctgctg actgttcttg
1501 tggatcttgt gtccagggac atggggtgac atgcctcgta tgtgttagag ggtggaatgg
1561 atgtgtttgg cgctgcatgg gatctggtgc ccctcttctc ctggattcac atccccaccc
1621 agggcccgct tttactaagt gttctgccct agattggttc aaggaggtca tccaactgac
1681 tttatcaagt ggaattggga tatatttgat atacttctgc ctaacaacat ggaaaagggt
1741 tttcttttcc ctgcaagcta catcctactg ctttgaactt ccaagtatgt ctagtcacct
1801 tttaaaatgt aaacattttc agaaaaatga ggattgcctt ccttgtatgc gctttttacc
1861 ttgactacct gaattgcaag ggatttttat atattcatat gttacaaagt cagcaactct
1921 cctgttggtt cattattgaa tgtgctgtaa attaagtcgt ttgcaattaa aacaaggttt
1981 gcccacaaaa aaaaaaaaaa aaaa
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