LOCUS BC014117 2119 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens thromboxane A synthase 1 (platelet), mRNA (cDNA clone
MGC:20885 IMAGE:4548935), complete cds.
ACCESSION BC014117
VERSION BC014117.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2119)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2119)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014117.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2119
/db_xref="H-InvDB:HIT000036529"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20885 IMAGE:4548935"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2119
/gene="TBXAS1"
/gene_synonym="CYP5"
/gene_synonym="CYP5A1"
/gene_synonym="GHOSAL"
/gene_synonym="THAS"
/gene_synonym="TS"
/gene_synonym="TXAS"
/gene_synonym="TXS"
/db_xref="GeneID:6916"
/db_xref="HGNC:HGNC:11609"
/db_xref="MIM:274180"
CDS 490..1890
/gene="TBXAS1"
/gene_synonym="CYP5"
/gene_synonym="CYP5A1"
/gene_synonym="GHOSAL"
/gene_synonym="THAS"
/gene_synonym="TS"
/gene_synonym="TXAS"
/gene_synonym="TXS"
/codon_start=1
/product="TBXAS1 protein"
/protein_id="AAH14117.1"
/db_xref="GeneID:6916"
/db_xref="HGNC:HGNC:11609"
/db_xref="MIM:274180"
/translation="MELRKLYGPLCGYYLGRRMFIVISEPDMIKQVLVENFSNFTNRM
ASGLEFKSVADSVLFLRDKRWEEVRGALMSAFSPEKLNEMVPLISQACDLLLAHLKRY
AESGDAFDIQRCYCNYTTDVVASVAFGTPVDSWQAPEDPFVKHCKRFFEFCIPRPILV
LLLSFPSIMVPLARILPNKNRDELNGFFNKLIRNVIALRDQQAAEERRRDFLQMVLDA
RHSASPMGVQDFDIVRDVFSSTGCKPNPSRQHQPSPMARPLTVDEIVGQAFIFLIAGY
EIITNTLSFATYLLATNPDCQEKLLREVDVFKEKHMAPEFCSLEEGLPYLDMVIAETL
RMYPPAFRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPETFNPERFTAE
ARQQHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFRFQACPETQVPLQLESK
SALGPKNGVYIKIVSR"
BASE COUNT 501 a 553 c 576 g 489 t
ORIGIN
1 gagggccggc ctggacccgg cgggcgcacg gctccgagcc cagcgcagcc gagccggtct
61 gcagaggggc ccccagaact ttgtgtgtgt gtgtgcacgc gcgcgcgtgt gtgcccaggt
121 gcgagggttc gcgcgtgtgc tggcggggag ggaaccgacc cgaaagagag ccccacgctg
181 gcaaagtggc tcgcccatct cacagccggt tggcgctcgc ggagctcttt attttccatg
241 tgtgagcctg tgcctgtggt ttatctctgg aggatgtgcc tgagggagga gacatatact
301 gcctggactg cctggctgat gtgagctagt ttgtctggtt gagttggatg tttaaataga
361 aggcagaaca acaacaggta ctccacatca gcattctcaa gactggagaa gttaggcctc
421 agacatccca agccttctcc tttcattgga aacttgacat ttttccgcca gggtttttgg
481 gaaagccaaa tggagctcag aaagctgtat ggacctctgt gtgggtacta tcttggtcgt
541 cggatgttta ttgttatttc tgagccagac atgatcaagc aggtgttggt tgagaacttc
601 agtaacttta ccaacagaat ggcgtcgggt ttggagttca agtcggtagc cgacagcgtt
661 ctgtttttac gtgacaaaag atgggaagag gtcagaggtg ccctgatgtc tgctttcagt
721 cctgaaaagc tgaacgagat ggttcccctc atcagccaag cctgcgacct tctcctggct
781 catttaaaac gctatgcgga atctggggac gcatttgaca tccagaggtg ctactgcaat
841 tacaccacag atgtggttgc cagcgtcgcc tttggcaccc cggtggactc ctggcaggcc
901 cctgaggatc cctttgtgaa acactgcaag cgtttcttcg aattctgcat ccccagacct
961 atcctggttt tactcttatc atttccatcc ataatggtcc cactggcccg gattttgccc
1021 aataagaacc gagacgaact gaatggcttt tttaacaaac tcattaggaa tgtgattgcc
1081 ttgcgggacc agcaagctgc cgaagagagg cggagagact tcctccaaat ggtcctggat
1141 gcccgacatt ctgcaagtcc catgggcgtg caagactttg acatcgtcag agacgttttc
1201 tcctctactg ggtgcaagcc gaacccttcc cggcaacacc agcccagccc tatggccagg
1261 cctttgactg tggatgagat tgtgggccag gccttcatct tcctcatcgc tggctatgaa
1321 atcatcacca acacactttc ttttgccacc tacctactgg ccaccaaccc tgactgccaa
1381 gagaagcttc tgagagaggt agacgttttt aaggagaaac acatggcccc tgagttctgc
1441 agcctcgagg aaggcctgcc ctatctggac atggtgattg cagagacgct gaggatgtac
1501 ccgccagctt tcagattcac acgggaggca gctcaggact gcgaggtgct ggggcagcgc
1561 atccccgcag gcgctgtgct agagatggcc gtgggtgccc tgcaccatga ccctgagcac
1621 tggccaagcc cggagacctt caaccctgaa aggttcacgg ctgaggcccg gcagcagcac
1681 cggcccttca cgtacctgcc cttcggggcc ggcccacgga gctgcctcgg ggtgcgtcta
1741 gggctgcttg aggtcaagtt gacactgctc cacgtgctgc acaagttccg gttccaagcc
1801 tgccctgaga cccaggtacc gctgcagcta gaatccaaat ctgccctagg tccaaaaaat
1861 ggtgtctata tcaagatcgt atcccgctga cacagaaggc tgccgggtgg ggggagggca
1921 cccccaaatt caaagaaaac cctaagtgtg gatgttcaga attttggaaa aatgtcactg
1981 aagtgattga aagagtgcct ggcatgcaag gataagaggt tctttacata acatttccta
2041 aatgcttaat aaacgtttgt tgcacttggt tttgacattg aaaaaaaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaaa
//