LOCUS BC014051 1758 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens small inducible cytokine subfamily E, member 1
(endothelial monocyte-activating), mRNA (cDNA clone MGC:20063
IMAGE:3638796), complete cds.
ACCESSION BC014051
VERSION BC014051.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1758)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1758)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014051.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45006985.
FEATURES Location/Qualifiers
source 1..1758
/db_xref="H-InvDB:HIT000036490"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20063 IMAGE:3638796"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1758
/gene="SCYE1"
/gene_synonym="EMAP II"
/gene_synonym="EMAP-2"
/gene_synonym="EMAP-II"
/gene_synonym="EMAP2"
/gene_synonym="EMAPII"
/gene_synonym="p43"
/db_xref="GeneID:9255"
/db_xref="HGNC:HGNC:10648"
/db_xref="MIM:603605"
CDS 80..1018
/gene="SCYE1"
/gene_synonym="EMAP II"
/gene_synonym="EMAP-2"
/gene_synonym="EMAP-II"
/gene_synonym="EMAP2"
/gene_synonym="EMAPII"
/gene_synonym="p43"
/codon_start=1
/product="small inducible cytokine subfamily E, member 1
(endothelial monocyte-activating)"
/protein_id="AAH14051.1"
/db_xref="GeneID:9255"
/db_xref="HGNC:HGNC:10648"
/db_xref="MIM:603605"
/translation="MANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLRE
EKKLRVENAKLKKEIEELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAV
TTVSSGTKEQIKGGTGDEKKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIG
CIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKM
RGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQP
DLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK"
BASE COUNT 602 a 287 c 364 g 505 t
ORIGIN
1 gacctacatg cttcctgctg tggctgtctc ggaacccgtg gtcctccgct tcatgatttt
61 ctgccgtctc ttggcaaaaa tggcaaataa tgatgctgtt ctgaagagac tggagcagaa
121 gggtgcagag gcagatcaaa tcattgaata tcttaagcag caagtttctc tacttaagga
181 gaaagcaatt ttgcaggcaa ctttgaggga agagaagaaa cttcgagttg aaaatgctaa
241 actgaagaaa gaaattgaag aactgaaaca agagctaatt caggcagaaa ttcaaaatgg
301 agtgaagcaa ataccatttc catctggtac tccactgcac gctaattcta tggtttctga
361 aaatgtgata cagtctacag cagtaacaac cgtatcttct ggtaccaaag aacagataaa
421 aggaggaaca ggagacgaaa agaaagcgaa agagaaaatt gaaaagaaag gagagaagaa
481 ggagaaaaaa cagcaatcaa tagctggaag tgccgactct aagccaatag atgtttcccg
541 tctggatctt cgaattggtt gcatcataac tgctagaaaa caccctgatg cagattcttt
601 gtatgtggaa gaagtagatg tcggagaaat agccccaagg acagttgtca gtggcctggt
661 gaatcatgtt cctcttgaac agatgcaaaa tcggatggtg attttacttt gtaacctgaa
721 acctgcaaag atgaggggag tattatctca agcaatggtc atgtgtgcta gttcaccaga
781 gaaaattgaa atcttggctc ctccaaatgg gtctgttcct ggagacagaa ttacttttga
841 tgctttccca ggagagcctg acaaggagct gaatcctaag aagaagattt gggagcagat
901 ccagcctgat cttcacacta atgatgagtg tgtggctaca tacaaaggag ttccctttga
961 ggtgaaaggg aagggagtat gtagggctca aaccatgagc aacagtggaa tcaaataaaa
1021 tgcttccact accaaaagac attagagaaa accttaaaag taataaagag aaatatattt
1081 gtcacttata cctaaaatat gagtggctca tttttgcatt actctcttct agacttgact
1141 agtcatttac ttggtatata ttgttttcat tgattgggga aacactagat ttttacctcg
1201 gtttttgatc atttataatg gagagaggaa gttgcctatg ttttgtaata atttattttt
1261 tagcaggaat attgattagc agcttttttt tctttataca catagataac taactagatt
1321 aatgtttagt ttcttatttg taggcacagg atgcatgaaa tttcaagctc tgggattttt
1381 tgtatattgt gtatctgtat caaaaatatc ctctcctttt caaaaatgac aggttggaaa
1441 atgtttgtca gacttattaa ctggtcatat tataataata ctgataatga ccaactgctc
1501 attctgaaag ccaaacataa aagctaggag aagtggcatc tgaacatttt tgctttgctg
1561 ccagagtaac cctgactaat aatacaataa cagcaatttt tttaaaaaac tgagatttcc
1621 tactggcttg aagtttttct atttagcaaa ataattagta ataagttttg actaggtcta
1681 aagaatgaac acattgtaaa cagttgccac agtagtttct aataaattga tcataaaagc
1741 aaaaaaaaaa aaaaaaaa
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