LOCUS BC013952 2187 bp mRNA linear HUM 28-OCT-2003
DEFINITION Homo sapiens nei like 2 (E. coli), mRNA (cDNA clone MGC:2832
IMAGE:2964742), complete cds.
ACCESSION BC013952
VERSION BC013952.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2187)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2187)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC013952.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450799.
FEATURES Location/Qualifiers
source 1..2187
/db_xref="H-InvDB:HIT000036422"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2832 IMAGE:2964742"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2187
/gene="NEIL2"
/gene_synonym="FLJ31644"
/gene_synonym="MGC2832"
/gene_synonym="MGC4505"
/gene_synonym="NEH2"
/db_xref="GeneID:252969"
CDS 46..1044
/gene="NEIL2"
/gene_synonym="FLJ31644"
/gene_synonym="MGC2832"
/gene_synonym="MGC4505"
/gene_synonym="NEH2"
/codon_start=1
/product="NEIL2 protein"
/protein_id="AAH13952.1"
/db_xref="GeneID:252969"
/translation="MPEGPLVRKFHHLVSPFVGQQVVKTGGSSKKLQPASLQSLWLQD
TQVHGKKLFLRFDLDEEMGPPGSSPTPEPPQKEVQKEGAADPKQVGEPSGQKTLDGSS
RSAELVPQGEDDSEYLERDAPAGDAGRWLRVSFGLFGSVWVNDFSRAKKANKRGDWRD
PSPRLVLHFGGGGFLAFYNCQLSWSSSPVVTPTCDILSEKFHRGQALEALGQAQPVCY
TLLDQRYFSGLGNIIKNEALYRAGIHPLSLGSVLSASRREVLVDHVVEFSTAWLQGKF
QGRPQHTQVYQKEQCPAGHQVMKEAFGPEDGLQRLTWWCPQCQPQLSEEPEQCQFS"
misc_feature 421..1005
/gene="NEIL2"
/gene_synonym="FLJ31644"
/gene_synonym="MGC2832"
/gene_synonym="MGC4505"
/gene_synonym="NEH2"
/note="Nei; Region: Formamidopyrimidine-DNA glycosylase
[DNA replication, recombination, and repair]"
/db_xref="CDD:COG0266"
BASE COUNT 532 a 481 c 636 g 538 t
ORIGIN
1 tagcggtgct gggtcgggcc gacgtgccac ccacccggag ccgggatgcc agaagggccg
61 ttggtgagga aatttcacca tttggtctcc ccctttgtgg gtcagcaggt ggtcaagaca
121 gggggcagca gtaagaagct acagcccgcc agcctgcagt ctctgtggct ccaggacacc
181 caggtccatg gaaagaaatt attccttaga tttgatctag atgaagaaat ggggccccct
241 ggcagcagcc caacaccaga gcctccacaa aaagaagtgc agaaggaagg ggctgcggac
301 ccaaagcagg tcggggagcc cagcgggcag aagacccttg atggatcctc acggtctgca
361 gagctcgtcc cccagggcga ggatgattct gagtatttgg agagagacgc ccctgcagga
421 gatgctggga ggtggctgcg tgtcagcttt ggtttgtttg gcagcgtttg ggtgaacgat
481 ttctccagag ccaagaaagc caacaagagg ggggactgga gggacccttc cccgaggttg
541 gtcctgcact ttggtggtgg tggcttcctg gcattttata attgtcagtt gtcttggagc
601 tcttccccgg tggtcacacc cacctgtgac atcctgtctg agaagttcca tcgaggacaa
661 gccttagaag ctctaggcca ggctcagcct gtctgctata cactgctgga ccagagatac
721 ttctcagggc tagggaacat cattaagaat gaagccttgt acagagctgg gatccatccc
781 ctttctctcg gttcagtcct gagtgcctcg cgtcgggagg tcctggtgga tcacgtggtg
841 gagttcagta cagcctggct gcagggcaag ttccaaggca gaccgcagca cacacaggtc
901 taccagaaag aacagtgccc tgctggccac caggtcatga aggaggcgtt tgggcccgaa
961 gatgggttac agaggctcac ctggtggtgc ccgcagtgcc agccccagtt gtcagaggag
1021 ccagagcagt gccagttctc ctaaggagct ggtggtgctc ctcatggaac cttgccgttg
1081 gggaacctga cgtctaagtg tccagaaagg aggatgtggg cagggacggg gtacagagga
1141 tagtgtgggt cagaggtgcc agtagtataa tattcatctc cctggagtta tgttgaaggc
1201 agagttttca tagggttaga ttttttttat ccttttctag ttcagttaat tcatcctgtt
1261 gaattgcacc atcgtgaaag atgggaaaaa tcgtgatgat gggtaagggg aaaacttccc
1321 ggaaggcaat ggggcaagga aaaagaaagc ctatgggaaa tggctgtgct cccaacatag
1381 ctttgcagat gatgtgggtt tttttttttt ttttttggtt gtttgttttg agagagagtc
1441 ttgctctgtc tccctggcta gggtgtggtg gtgtgatctt ggctcacggc agccttgccc
1501 tccctggctc aagcagtctt catctcagcc tccagagtag ctgggactac aggcatgtga
1561 tatgatgctc ggctgatttt tgtttacttt ttagagagat ggggtcttgc catatttgcc
1621 aggctggttt gaactcctac aactcaagca ttcctcccac cttggtctcc caaaatgttg
1681 ggaccacggg tgtgagccac cgcgcccagc tagctcctgt gttttgtttt tgttttgtaa
1741 ctttggttga tgttaaggcc ctccattttg gaaagcagga aaacaggatt tttttttttt
1801 atcttgttcc ctggaggatc cagggatgag gatagagtgg cctgagagca gtgcttggat
1861 tcagcctcct gctgggtcct tctgctggat acaggcacca agaggcgggg gtggagcagg
1921 gagctgcgcc ttcctggggt gcccggtggt gtgtagagaa aagctgcttg tttactcctt
1981 aagtcaatgt attggtgact gttgatttgt tgaacaattc aggaatcaag ggctgtggag
2041 aaactccctc atgttgttgg caacaggtga atgaacctag agcggtgaca tgaaaataaa
2101 gctcactgtt actcgcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//