LOCUS BC013891 2182 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens amiloride-sensitive cation channel 2, neuronal, mRNA
(cDNA clone IMAGE:3927471), partial cds.
ACCESSION BC013891
VERSION BC013891.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2182)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2182)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC013891.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: n Column: 6.
FEATURES Location/Qualifiers
source 1..2182
/db_xref="H-InvDB:HIT000088220"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3927471"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2182
/gene="ACCN2"
/gene_synonym="ASIC"
/gene_synonym="ASIC1A"
/gene_synonym="BNaC2"
/db_xref="GeneID:41"
/db_xref="MIM:602866"
CDS <1..1035
/gene="ACCN2"
/gene_synonym="ASIC"
/gene_synonym="ASIC1A"
/gene_synonym="BNaC2"
/codon_start=1
/product="ACCN2 protein"
/protein_id="AAH13891.2"
/db_xref="GeneID:41"
/db_xref="MIM:602866"
/translation="PVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVA
CQEQRLIYLPPPWGTCKAVTMDSDLDFFDSYSITACRIDCETRYLVENCNCRMVHMPG
DAPYCTPEQYKECADPALDFLVEKDQEYCVCEMPCNLTRYGKELSMVKIPSKASAKYL
AKKFNKSEQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGELLMTPVPFSCHGHG
VAPYHPKAGCSLLSHEGPPPQRPFPKPCCLGDIGGQMGLFIGASILTVLELFDYAYEV
IKHKLCRRGKCQKEAKRSSADKGVALSLDDVKRHNPCESLRGHPAGMTYAANILPHHP
ARGTFEDFTC"
misc_feature 25..816
/gene="ACCN2"
/gene_synonym="ASIC"
/gene_synonym="ASIC1A"
/gene_synonym="BNaC2"
/note="ASC; Region: Amiloride-sensitive sodium channel"
/db_xref="CDD:pfam00858"
BASE COUNT 539 a 646 c 523 g 474 t
ORIGIN
1 cctgtgtggg gggagactga cgagacgtcc ttcgaagcag gcatcaaagt gcagatccat
61 agtcaggatg aacctccttt catcgaccag ctgggctttg gcgtggcccc aggcttccag
121 acctttgtgg cctgccagga gcagcggctc atctacctgc ccccaccctg gggcacctgc
181 aaagctgtta ccatggactc ggatttggat ttcttcgact cctacagcat cactgcctgc
241 cgcatcgact gtgagacgcg ctacctggtg gagaactgca actgccgcat ggtgcacatg
301 ccaggggatg ccccatactg tactccagag cagtacaagg agtgtgcaga tcctgctctg
361 gacttcctgg tggagaagga ccaggagtac tgcgtgtgtg aaatgccttg caacctgacc
421 cgctatggca aagagctgtc catggtcaag atccccagca aagcctcagc caagtacctg
481 gccaagaagt tcaacaaatc tgagcaatac ataggggaga acatcctggt gctggacatt
541 ttctttgaag tcctcaacta tgagaccatt gaacagaaga aggcctatga gattgcaggg
601 ctcctgggtg agctgctgat gacacctgtc cccttctcat gccatgggca tggcgtggct
661 ccctatcatc caaaagcagg gtgctcactt ctgtcccatg agggtcctcc accccagagg
721 cccttcccca aaccctgttg tcttggtgac atcgggggcc agatggggct gttcatcggg
781 gccagcatcc tcacggtgct ggagctcttt gactacgcct acgaggtcat taagcacaag
841 ctgtgccgac gaggaaaatg ccagaaggag gccaaaagga gcagtgcgga caagggcgtg
901 gccctcagcc tggacgacgt caaaagacac aacccgtgcg agagccttcg gggccaccct
961 gccgggatga catacgctgc caacatccta cctcaccatc cggcccgagg cacgttcgag
1021 gactttacct gctgagcccc gcaggccgct gaaccaaagg cctagatggg gaggactagg
1081 agagcgaggg ggcccccagc tgcctcctca catctgccct ggggactccc cacactccgg
1141 ggcagatctt tcctcttgtc tgtggtaagg aaggagtctt gaccatagag tcctctctct
1201 gcctctatcc cattcttttt acatttaaca aaactaatct aaaaaagaac taaaaaggga
1261 gaacggggca agggacctca ggctgcccct ctctcctcca tgctgcctcc cctagctccc
1321 agcctgaatt ctgtctatct agctgtctgc catctgagtg tccatctaca ttctgctgcc
1381 accagtcacc aaaggccctt cccagtgagg ggtggaaggg atctctgggg tctggaattt
1441 ggccccaaac cagagaatgt accttaaggg ggagggctag tgtgggggag ggaggcttcc
1501 ccagccttaa gagaccctct cagcccagtg actgtcccca aacccaagtc tcctggcagg
1561 aactaaaacc tcagccccac tctctcacac catgtggaat ctcgtggggg tcggggatcc
1621 ccttaagaag tggtaatggg gacaagatgc ggccctggtg ctgtaggcta catcctgata
1681 cctataagtt cacccccacc ccacagctgc tggagagaaa tcccaagagg cagcccttcc
1741 tcaccatccc attaaagacc tggctggtta gcgtccagct cagggagaag ggcgctagtg
1801 cctaacctca ctggtccctc tcccggaggc ccttgtagag ggccacgtcc ataaattttc
1861 ttatggaact ctcccacatc ctcttcccca acttcatttg cttctctcaa caacctcatc
1921 tgcattttct atttctatat gatacagact ctatattgct atatctctgt atatactttc
1981 ccagccctgt ctgtctccac cccatcccct cttgtctctg agaaccattc tcccacccca
2041 agttccacct tctatgtttc tactccctcc ctggtctctg aatgccttcg cctgtataaa
2101 gagttggact ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aa
//