LOCUS BC013809 668 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transcription elongation factor B (SIII), polypeptide
1 (15kDa, elongin C), mRNA (cDNA clone MGC:8963 IMAGE:3923736),
complete cds.
ACCESSION BC013809
VERSION BC013809.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 668)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 668)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16933562.
FEATURES Location/Qualifiers
source 1..668
/db_xref="H-InvDB:HIT000036375"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8963 IMAGE:3923736"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..668
/gene="TCEB1"
/gene_synonym="SIII"
/db_xref="GeneID:6921"
/db_xref="HGNC:HGNC:11617"
/db_xref="MIM:600788"
CDS 86..424
/gene="TCEB1"
/gene_synonym="SIII"
/codon_start=1
/product="transcription elongation factor B (SIII),
polypeptide 1 (15kDa, elongin C)"
/protein_id="AAH13809.1"
/db_xref="GeneID:6921"
/db_xref="HGNC:HGNC:11617"
/db_xref="MIM:600788"
/translation="MDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKA
MLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALE
LLMAANFLDC"
BASE COUNT 231 a 113 c 134 g 190 t
ORIGIN
1 cggggacccg gctgcggtgg ctgcgggact gacgagaaac tactaaagtt cctggggaag
61 caaagtagaa tttcataaga acaaaatgga tggagaggag aaaacctatg gtggctgtga
121 aggacctgat gccatgtatg tcaaattgat atcatctgat ggccatgaat ttattgtaaa
181 aagagaacat gcattaacat caggcacgat aaaagccatg ttgagtggcc caggtcagtt
241 tgctgagaac gaaaccaatg aggtcaattt tagagagata ccttcacatg tgctatcgaa
301 agtatgcatg tattttacgt acaaggttcg ctacactaac agctccaccg agattcctga
361 attcccaatt gcacctgaaa ttgcactgga actgctgatg gctgcgaact tcttagattg
421 ttaaataaaa taaattataa taaactgtta actcttttca gtatttaata cctgtagttc
481 agttagtaac tttttcatat atagcatgtt gcctgtatgc agttgaacta tataaagttc
541 attgcaaagc agattatctt gtttttttgc atagcaatca aagttgaaat ttgtttgcta
601 catcaacaaa ttaaggacat tttcacaaac tgagaaataa acaaatatgc caattaaaaa
661 aaaaaaaa
//