LOCUS BC013757 2344 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens leucine rich repeat containing 58, mRNA (cDNA clone
IMAGE:4525041), partial cds.
ACCESSION BC013757
VERSION BC013757.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2344)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2344)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..2344
/db_xref="H-InvDB:HIT000088166"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4525041"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2344
/gene="LRRC58"
/db_xref="GeneID:116064"
/db_xref="HGNC:HGNC:26968"
/db_xref="IMGT/GENE-DB:26968"
/db_xref="MIM:26968"
CDS <1..1212
/gene="LRRC58"
/codon_start=1
/product="LRRC58 protein"
/protein_id="AAH13757.1"
/db_xref="GeneID:116064"
/db_xref="HGNC:HGNC:26968"
/db_xref="IMGT/GENE-DB:26968"
/db_xref="MIM:26968"
/translation="LGSGSGAPQSCRPLDRARRSGESGATRRAVARMEEAGAAVVTAG
EAELNWSRLSVSTETLESELEARGEERRGAREALLRLLLPHNRLVSLPRALGSGFPHL
QLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS
GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELG
NLPSLNYLVLCDNKIQSIPPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLEELSLRG
NPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYDLPGNLLRYLGSASNCPNPKCG
GVYFDCCVRQIKFVDFCGKYRLPLMHYLCSPECSSPCSSASHSSTSQSESDSEDEASV
AARRMQKVLLG"
BASE COUNT 655 a 538 c 515 g 636 t
ORIGIN
1 ctcggttcag gttccggggc gccgcagagc tgccggcctc tggaccgcgc gcggcgctct
61 ggggaatccg gcgccacgcg ccgtgcggtg gccaggatgg aggaggccgg agcagcggtg
121 gtcacggccg gggaggccga actgaactgg tcccgcctca gcgtgtccac cgagacgctg
181 gagtctgagc tggaggcgcg gggggaggag cggcgcgggg cgcgggaggc gctgctgcgg
241 ctgctgctgc ctcacaaccg tctggtgtcg ctgccacggg cgctgggcag cggcttcccg
301 cacctccagc tgctggacgt gagcggcaac gcgttgaccg cgctcgggcc ggagctgctc
361 gctctgcgcg gcctgcgcac gctgctggcc aagaacaacc ggctcggcgg gcccagtgcg
421 ctgcccaagg gcctggccca gtcgccgctc tgccgcagcc tccaggtgct caacctcagc
481 ggcaactgtt tccaggaggt gcctgcctcg ctcttagagc tgcgcgcgct gcagaccctg
541 agcctgggcg gcaaccaact gcagagcatc ccggctgaga tcgagaactt gcagagttta
601 gagtgtttat atcttggagg aaatttcatt aaagaaatcc caccagaatt aggaaatctg
661 ccttctctga attatttggt attatgtgac aacaaaatcc aaagcatacc tcctcaactt
721 tcacagttac attcacttcg ttccctaagt cttcacaata acttgctgac atatctgcct
781 cgagagatcc tcaaccttat tcatttggaa gagttgagtt tacgaggaaa tccattggtt
841 gttcgttttg ttagagattt aacctatgat cctccaactc tcctggaatt agctgcacgg
901 accattaaga ttcgaaatat ttcctacact ccctatgatc ttcctggaaa tcttcttaga
961 tacttgggtt cagccagcaa ttgcccaaac ccaaagtgtg gaggagtcta ctttgactgc
1021 tgtgtcagac aaattaaatt tgtggacttc tgtgggaagt atcgcctccc actgatgcac
1081 tacttgtgtt caccagaatg ttcttcccct tgcagttctg cctctcacag ctccacttcc
1141 cagagtgaat ctgactcaga agatgaagct agtgttgctg cacgcagaat gcagaaagtt
1201 cttcttggtt gaacaggagt gcacagtgtt gtgaaatact taaaaaactg agcaaaatgg
1261 ttagacaaga aaatagagct tgaagttcac tagaaatctt atcttcatct taagtgttca
1321 tcaaagagtc tgggatgata taaaacattt tgtgtttcat ctacccattc agcaagaatg
1381 agtccagtcc catgtttaga ttattttaac ataatttgtg aatgatagtt tcacatttgg
1441 ctgatggttt gcagttttca ctcaagtttt gcatgaatca caaagcagaa tggtaccttt
1501 tgaagagcag ttctgcaata agtcatgagt agtataactt ttggacattg agatggagaa
1561 agtgagaaat tatcaaagct ataattgcca gagttgccct tgggtttagg tagaacactg
1621 tataccatat atactatata ccatatatac tatatatacc atatatatta tatgccataa
1681 acaggattaa ccctcccttt tctaattgcc tgtatgtcta gattacagaa ctattcaaag
1741 aagctcacag atggttacat gggacaaacc tttctgacaa gctaactggt aaagtaaggc
1801 atataacatt tacatgagat attaaaactt tttcattatt atcctttgtt ctatatgatt
1861 gctattaacc ttatgtaatc tagcaatgac tgttatagtg ccttaatcca gcaaggatat
1921 aaaaatgtat tcaagaagta atgccagagc aacctataac ctgacacacc atgcagaaca
1981 ttgtaaaata ttctttaaca gaactaggta aataactgtg tatctaatat ccgatctcat
2041 ggccctctta acattttttt gtttaaatgt gcactcatcc cttataagca cattactttt
2101 acacttaatg gtaggccaca atcttcatca atctgttcat cataagacag agtaagaatt
2161 tttaacagaa aattctaaaa gagatagaag ctaggaaagc ttctttatat cttgcattaa
2221 atgggtaggg aaaaaatatg actctcaccc atgtcatgta ctggaccatc tttctctact
2281 ttttaaagaa aaactaatac aactagaaaa acatcacaac aagccaaata aaaaaaaaaa
2341 aaaa
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