LOCUS BC013635 2249 bp mRNA linear HUM 19-APR-2005
DEFINITION Homo sapiens GTPase activating protein and VPS9 domains 1, mRNA
(cDNA clone IMAGE:3451647), partial cds.
ACCESSION BC013635
VERSION BC013635.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2249)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2249)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: a Column: 19.
FEATURES Location/Qualifiers
source 1..2249
/db_xref="H-InvDB:HIT000088141"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3451647"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2249
/gene="GAPVD1"
/gene_synonym="DKFZP434C212"
/gene_synonym="KIAA1521"
/db_xref="GeneID:26130"
CDS <1..1652
/gene="GAPVD1"
/gene_synonym="DKFZP434C212"
/gene_synonym="KIAA1521"
/codon_start=3
/product="GAPVD1 protein"
/protein_id="AAH13635.1"
/db_xref="GeneID:26130"
/translation="EAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPSWNRRPGNEERE
LPSAAAIGATSLVAAPHSSSSSPSKDSSRGETEERKDSDDEKSDRNRPWWRKRFVSAM
PKDDPSPRLSAQAQVAEDILDKYRNAIKRTSPSDGAMANYESTEVMGDGESAHDSPRD
EALQNISADDLPDSASQAAHPQDSAFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGL
PDHTDPEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAE
DYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEK
KIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSV
MNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQS
EIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPC
LLSTVQYISSFYASCLSGEESYWWMQFTAAVEFIKTIDDRK"
BASE COUNT 694 a 479 c 498 g 578 t
ORIGIN
1 tggaggcatt caagcaaagg cattcttacc ctgagagact agttcgaagc aggagctctg
61 atatagtatc ttctgtccgg agacccatga gtgaccccag ctggaaccgg cgtccaggaa
121 atgaagagcg agaactccct tcagctgcag ccattggtgc tacttctttg gtggctgcac
181 ctcattcatc atcttcatcc ccgagtaagg actcctcaag aggagagact gaagaacgca
241 aagatagcga tgatgagaaa tcagacagga acagaccttg gtggagaaaa cgttttgttt
301 cagccatgcc taaagatgat cccagcccta gactcagtgc acaagctcag gtggctgagg
361 atattctgga caaatacagg aatgccatta aacggaccag ccccagtgat ggagcaatgg
421 caaactatga aagtacagag gttatgggtg atggtgaaag tgcacatgat tctccccgtg
481 acgaagcact gcagaacatc tcggctgatg atctcccaga ctctgcaagc caagcagccc
541 acccgcagga ttcagctttc tcttacagag atgcaaaaaa gaaactgagg cttgctcttt
601 gctctgcgga ctctgttgcc ttcccagtgc tgacccattc aacaaggaat ggtttaccag
661 accacacaga cccagaagac aatgaaattg tatgcttctt aaaagttcaa atagctgaag
721 caattaattt acaagataag aatctaatgg ctcaacttca agaaacaatg cgctgtgtgt
781 gccgttttga taataggact tgtaggaaac tgctggcttc gattgctgag gactacagaa
841 aaagagcccc atatattgct tatctcactc gttgtcgaca aggactacag accacacagg
901 ctcacctgga aaggctattg caaagagttt tgcgggacaa agaagtggcc aatcgatact
961 ttaccactgt ctgtgtgaga ttactgcttg agagcaaaga aaagaagatc agggaattca
1021 ttcaagactt tcagaaactc accgcagctg acgataaaac tgctcaggta gaagattttc
1081 tgcagtttct ttatggtgca atggcccagg atgtcatatg gcaaaacgcg agtgaagaac
1141 agcttcaaga tgcacagctg gccattgagc gaagcgtgat gaaccggatt ttcaagctcg
1201 ccttctaccc taatcaagat ggggacatac ttcgcgacca ggttcttcat gaacatatcc
1261 agagattgtc taaagtagtg actgcaaatc acagagctct tcagatacca gaggtttatc
1321 ttcgagaagc accatggcca tctgcacaat cagaaatcag gacaataagt gcttataaaa
1381 ccccccggga caaagtgcag tgcatcctga gaatgtgctc tacgattatg aacctcctga
1441 gcctggccaa tgaggactct gtccctggag cggatgactt tgttcctgtg ttggtgtttg
1501 tgttgataaa ggcaaatcca ccctgtttgc tgtctactgt gcagtatatc agtagctttt
1561 atgctagctg tctgtctgga gaggagtcct attggtggat gcagttcaca gcagcagtag
1621 aattcattaa aaccatcgat gaccgaaagt gaccaagacc aaggcccacc aaggcagcag
1681 actgttaatc agacaaacag atctctgaga aggtgcatca gctgctttga aggctgaaga
1741 ttgttttgta tgatactgca cagcatcagg cattttaaag cagatcttta ctaaacaggt
1801 taatgagcta acaagcaggt tctctcgtct ttgggctctt tcctttctga gttgcatatt
1861 ctattttctt gtccccaagt agagactagt actacaaaaa gggaccacat ttttcaagta
1921 tttctaagta taaaaaacaa aacaaaaatc tcttaggaaa tgtctagacc tccattcttg
1981 gattcccttt ctttcctttt attttaaaaa agaacagtac ccctctttta agatgctgtc
2041 ttacattaat gagcatctaa tggaaagaag gtatgagttg cactgaggat tagaatagtg
2101 gtgcgttagt ggcattatct ataaatacac tcacctaaat tgaaagctaa gaaggaaatg
2161 taaatataat atatatttat atttgatgta atatggacat ctgcagattc taataaacaa
2221 ggactattgc tgataaaaaa aaaaaaaaa
//