LOCUS BC013569 772 bp mRNA linear HUM 06-JUL-2004
DEFINITION Homo sapiens PYD and CARD domain containing, mRNA (cDNA clone
IMAGE:3902319), partial cds.
ACCESSION BC013569
VERSION BC013569.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 772)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 772)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: o Column: 22.
FEATURES Location/Qualifiers
source 1..772
/db_xref="H-InvDB:HIT000036279"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3902319"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..772
/gene="PYCARD"
/gene_synonym="ASC"
/gene_synonym="CARD5"
/gene_synonym="MGC10332"
/gene_synonym="TMS1"
/db_xref="GeneID:29108"
/db_xref="MIM:606838"
CDS <1..581
/gene="PYCARD"
/gene_synonym="ASC"
/gene_synonym="CARD5"
/gene_synonym="MGC10332"
/gene_synonym="TMS1"
/codon_start=3
/product="PYCARD protein"
/protein_id="AAH13569.2"
/db_xref="GeneID:29108"
/db_xref="MIM:606838"
/translation="ARDAILDALENLTAEELKKFKLKLLSVPLREGYGRIPRGALLSM
DALDLTDKLVSFYLETYGAELTANVLRDMGLQEMAGQLQAATHQGSGAAPAGIQAPPQ
SAAKPGLHFIDQHRAALIARVTNVEWLLDALYGKVLTDEQYQAVRAEPTNPSKMRKLF
SFTPAWNWTCKDLLLQALRESQSYLVEDLERS"
BASE COUNT 232 a 220 c 206 g 114 t
ORIGIN
1 gcgcgcgcga cgccatcctg gatgcgctgg agaacctgac cgccgaggag ctcaagaagt
61 tcaagctgaa gctgctgtcg gtgccgctgc gcgagggcta cgggcgcatc ccgcggggcg
121 cgctgctgtc catggacgcc ttggacctca ccgacaagct ggtcagcttc tacctggaga
181 cctacggcgc cgagctcacc gctaacgtgc tgcgcgacat gggcctgcag gagatggccg
241 ggcagctgca ggcggccacg caccagggct ctggagccgc gccagctggg atccaggccc
301 ctcctcagtc ggcagccaag ccaggcctgc actttataga ccagcaccgg gctgcgctta
361 tcgcgagggt cacaaacgtt gagtggctgc tggatgctct gtacgggaag gtcctgacgg
421 atgagcagta ccaggcagtg cgggccgagc ccaccaaccc aagcaagatg cggaagctct
481 tcagtttcac accagcctgg aactggacct gcaaggactt gctcctccag gccctaaggg
541 agtcccagtc ctacctggtg gaggacctgg agcggagctg aggctccttc ccagcaacac
601 tccggtcagc ccctggcaat cccaccaaat catcctgaat ctgatctttt tatacacaat
661 atacgaaaag ccagcttgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
721 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//