LOCUS BC013380 1820 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin, beta, mRNA (cDNA clone MGC:16525
IMAGE:4025526), complete cds.
ACCESSION BC013380
VERSION BC013380.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1820)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1820)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013380.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5016088.
FEATURES Location/Qualifiers
source 1..1820
/db_xref="H-InvDB:HIT000036240"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16525 IMAGE:4025526"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1820
/gene="ACTB"
/gene_synonym="PS1TP5BP1"
/db_xref="GeneID:60"
/db_xref="HGNC:HGNC:132"
/db_xref="MIM:102630"
CDS 76..1203
/gene="ACTB"
/gene_synonym="PS1TP5BP1"
/codon_start=1
/product="actin, beta"
/protein_id="AAH13380.1"
/db_xref="GeneID:60"
/db_xref="HGNC:HGNC:132"
/db_xref="MIM:102630"
/translation="MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP
VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVT
HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY
VALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHE
TTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE
RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF"
BASE COUNT 406 a 538 c 454 g 422 t
ORIGIN
1 accgcgtccg ccccgcgagc acagagcctc gcctttgccg atccgccgcc cgtccacacc
61 cgccgccagc tcaccatgga tgatgatatc gccgcgctcg tcgtcgacaa cggctccggc
121 atgtgcaagg ccggcttcgc gggcgacgat gccccccggg ccgtcttccc ctccatcgtg
181 gggcgcccca ggcaccaggg cgtgatggtg ggcatgggtc agaaggattc ctatgtgggc
241 gacgaggccc agagcaagag aggcatcctc accctgaagt accccatcga gcacggcatc
301 gtcaccaact gggacgacat ggagaaaatc tggcaccaca ccttctacaa tgagctgcgt
361 gtggctcccg aggagcaccc cgtgctgctg accgaggccc ccctgaaccc caaggccaac
421 cgcgagaaga tgacccagat catgtttgag accttcaaca ccccagccat gtacgttgct
481 atccaggctg tgctatccct gtacgcctct ggccgtacca ctggcatcgt gatggactcc
541 ggtgacgggg tcacccacac tgtgcccatc tacgaggggt atgccctccc ccatgccatc
601 ctgcgtctgg acctggctgg ccgggacctg actgactacc tcatgaagat cctcaccgag
661 cgcggctaca gcttcaccac cacggccgag cgggaaatcg tgcgtgacat taaggagaag
721 ctgtgctacg tcgccctgga cttcgagcaa gagatggcca cggctgcttc cagctcctcc
781 ctggagaaga gctacgagct gcctgacggc caggtcatca ccattggcaa tgagcggttc
841 cgctgccctg aggcactctt ccagccttcc ttcctgggca tggagtcctg tggcatccac
901 gaaactacct tcaactccat catgaagtgt gacgtggaca tccgcaaaga cctgtacgcc
961 aacacagtgc tgtctggcgg caccaccatg taccctggca ttgccgacag gatgcagaag
1021 gagatcactg ccctggcacc cagcacaatg aagatcaaga tcattgctcc tcctgagcgc
1081 aagtactccg tgtggatcgg cggctccatc ctggcctcgc tgtccacctt ccagcagatg
1141 tggatcagca agcaggagta tgacgagtcc ggcccctcca tcgtccaccg caaatgcttc
1201 taggcggact atgacttagt tgcgttacac cctttcttga caaaacctaa cttgcgcaga
1261 aaacaagatg agattggcat ggctttattt gttttttttg ttttgttttg gttttttttt
1321 ttttttttgg cttgactcag gatttaaaaa ctggaacggt gaaggtgaca gcagtcggtt
1381 ggagcgagca tcccccaaag ttcacaatgt ggccgaggac tttgattgca cattgttgtt
1441 tttttaatag tcattccaaa tatgagatgc gttgttacag gaagtccctt gccatcctaa
1501 aagccacccc acttctctct aaggagaatg gcccagtcct ctcccaagtc cacacagggg
1561 aggtgatagc attgctttcg tgtaaattat gtaatgcaaa atttttttaa tcttcgcctt
1621 aatacttttt tattttgttt tattttgaat gatgagcctt cgtgcccccc cttccccctt
1681 ttttgtcccc caacttgaga tgtatgaagg cttttggtct ccctgggagt gggtggaggc
1741 agccagggct tacctgtaca ctgacttgag accagttgaa taaaagtgca caccttaaaa
1801 aaaaaaaaaa aaaaaaaaaa
//