LOCUS BC013039 736 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens growth arrest and DNA-damage-inducible, gamma
interacting protein 1, mRNA (cDNA clone IMAGE:3537574), partial
cds.
ACCESSION BC013039
VERSION BC013039.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 736)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 736)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC013039.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: i Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..736
/db_xref="H-InvDB:HIT000036095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3537574"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..736
/gene="GADD45GIP1"
/gene_synonym="CKBBP2"
/gene_synonym="CRIF1"
/gene_synonym="MGC4667"
/gene_synonym="MGC4758"
/gene_synonym="PLINP-1"
/gene_synonym="Plinp1"
/gene_synonym="PRG6"
/db_xref="GeneID:90480"
/db_xref="MIM:605162"
CDS <1..666
/gene="GADD45GIP1"
/gene_synonym="CKBBP2"
/gene_synonym="CRIF1"
/gene_synonym="MGC4667"
/gene_synonym="MGC4758"
/gene_synonym="PLINP-1"
/gene_synonym="Plinp1"
/gene_synonym="PRG6"
/codon_start=1
/product="GADD45GIP1 protein"
/protein_id="AAH13039.2"
/db_xref="GeneID:90480"
/db_xref="MIM:605162"
/translation="AASVRQARSLLGVAATLAPGSRGYRARPPPRRRPGPRWPDPEDL
LTPRWQLGPRYAAKQFARYGAASGVVPGSLWPSPEQLRELEAEEREWYPSLATMQESL
RVKQLAEEQKRREREQHIAECMAKMPQMIVNWQQQQRENWEKAQADKERRARLQAEAQ
ELLGYQVDPRSARFQELLQDLEKKERKRLKEEKQKRKKEARAAALAAAVAQDPAASGA
PSS"
BASE COUNT 167 a 221 c 258 g 90 t
ORIGIN
1 gcggcgtccg tgcgacaggc acgcagccta ctaggtgtgg cggcgaccct ggccccgggt
61 tcccgtggct accgggcgcg gccgcccccg cgccgcaggc cgggaccccg gtggccagac
121 cccgaggacc tcctgacccc gcggtggcag ctgggaccgc gctacgcggc taagcagttc
181 gcgcgttacg gcgccgcctc cggggtggtc cccggttcgt tatggccgtc gccggagcag
241 ctgcgggagc tggaggccga agaacgcgaa tggtacccga gcctggcgac catgcaggag
301 tcgctgcggg tgaagcagct ggccgaagag cagaagcgtc gggagaggga gcagcacatc
361 gcagagtgca tggccaagat gccacagatg attgtgaact ggcagcagca gcagcgggag
421 aactgggaga aggcccaggc tgacaaggag aggagggccc gactgcaggc tgaggcccag
481 gagctcctgg gctaccaggt ggacccaagg agtgcccgct tccaggagct gctccaggac
541 ctagagaaga aggagcgcaa gcgcctcaag gaggaaaaac agaaacggaa gaaggaggcg
601 cgagctgctg cattggctgc agctgtggct caagacccag cagcctctgg ggcacccagc
661 tcctgaggct ttgtcccttc ccaataaagc ctgctacctg gcagtacccc tgaaaaaaaa
721 aaaaaaaaaa aaaaaa
//