LOCUS BC013000 3578 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens GLI family zinc finger 1, mRNA (cDNA clone MGC:3590
IMAGE:3531657), complete cds.
ACCESSION BC013000
VERSION BC013000.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3578)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3578)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 31, 2003 this sequence version replaced BC013000.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: h Column: 7.
FEATURES Location/Qualifiers
source 1..3578
/db_xref="H-InvDB:HIT000036071"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3590 IMAGE:3531657"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3578
/gene="GLI1"
/db_xref="GeneID:2735"
/db_xref="HGNC:HGNC:4317"
/db_xref="MIM:165220"
CDS 39..3359
/gene="GLI1"
/codon_start=1
/product="GLI family zinc finger 1"
/protein_id="AAH13000.1"
/db_xref="GeneID:2735"
/db_xref="HGNC:HGNC:4317"
/db_xref="MIM:165220"
/translation="MFNSMTPPPISSYGEPCCLRPLPSQGAPSVGTEGLSGPPFCHQA
NLMSGPHSYGPARETNSCTEGPLFSSPRSAVKLTKKRALSISPLSDASLDLQTVIRTS
PSSLVAFINSRCTSPGGSYGHLSIGTMSPSLGFPAQMNHQKGPSPSFGVQPCGPHDSA
RGGMIPHPQSRGPFPTCQLKSELDMLVGKCREEPLEGDMSSPNSTGIQDPLLGMLDGR
EDLEREEKREPESVYETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCS
RELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE
HEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAH
VTKRHRGDGPLPRAPSISTVEPKREREGGPIREESRLTVPEGAMKPQPSPGAQSSCSS
DHSPAGSAANTDSGVEMTGNAGGSTEDLSSLDEGPCIAGTGLSTLRRLENLRLDQLHQ
LRPIGTRGLKLPSLSHTGTTVSRRVGPPVSLERRSSSSSSISSAYTVSRRSSLASPFP
PGSPPENGASSLPGLMPAQHYLLRARYASARGGGTSPTAASSLDRIGGLPMPPWRSRA
EYPGYNPNAGVTRRASDPAQAADRPAPARVQRFKSLGCVHTPPTVAGGGQNFDPYLPT
SVYSPQPPSITENAAMDARGLQEEPEVGTSMVGSGLNPYMDFPPTDTLGYGGPEGAAA
EPYGARGPGSLPLGPGPPTNYGPNPCPQQASYPDPTQETWGEFPSHSGLYPGPKALGG
TYSQCPRLEHYGQVQVKPEQGCPVGSDSTGLAPCLNAHPSEGPPHPQPLFSHYPQPSP
PQYLQSGPYTQPPPDYLPSEPRPCLDFDSPTHSTGQLKAQLVCNYVQSQQELLWEGGG
REDAPAQEPSYQSPKFLGGSQVSPSRAKAPVNTYGPGFGPNLPNHKSGSYPTPSPCHE
NFVVGANRASHRAAAPPRLLPPLPTCYGPLKVGGTNPSCGHPEVGRLGGGPALYPPPE
GQVCNPLDSLDLDNTQLDFVAILDEPQGLSPPPSHDQRGSSGHTPPPSGPPNMAVGNM
SVLLRSLPGETEFLNSSA"
BASE COUNT 796 a 1141 c 939 g 702 t
ORIGIN
1 cccagacaga gtgtccccac accctcctct gagacgccat gttcaactcg atgaccccac
61 caccaatcag tagctatggc gagccctgct gtctccggcc cctccccagt cagggggccc
121 ccagtgtggg gacagaagga ctgtctggcc cgcccttctg ccaccaagct aacctcatgt
181 ccggccccca cagttatggg ccagccagag agaccaacag ctgcaccgag ggcccactct
241 tttcttctcc ccggagtgca gtcaagttga ccaagaagcg ggcactgtcc atctcacctc
301 tgtcggatgc cagcctggac ctgcagacgg ttatccgcac ctcacccagc tccctcgtag
361 ctttcatcaa ctcgcgatgc acatctccag gaggctccta cggtcatctc tccattggca
421 ccatgagccc atctctggga ttcccagccc agatgaatca ccaaaaaggg ccctcgcctt
481 cctttggggt ccagccttgt ggtccccatg actctgcccg gggtgggatg atcccacatc
541 ctcagtcccg gggacccttc ccaacttgcc agctgaagtc tgagctggac atgctggttg
601 gcaagtgccg ggaggaaccc ttggaaggtg atatgtccag ccccaactcc acaggcatac
661 aggatcccct gttggggatg ctggatgggc gggaggacct cgagagagag gagaagcgtg
721 agcctgaatc tgtgtatgaa actgactgcc gttgggatgg ctgcagccag gaatttgact
781 cccaagagca gctggtgcac cacatcaaca gcgagcacat ccacggggag cggaaggagt
841 tcgtgtgcca ctgggggggc tgctccaggg agctgaggcc cttcaaagcc cagtacatgc
901 tggtggttca catgcgcaga cacactggcg agaagccaca caagtgcacg tttgaagggt
961 gccggaagtc atactcacgc ctcgaaaacc tgaagacgca cctgcggtca cacacgggtg
1021 agaagccata catgtgtgag cacgagggct gcagtaaagc cttcagcaat gccagtgacc
1081 gagccaagca ccagaatcgg acccattcca atgagaagcc gtatgtatgt aagctccctg
1141 gctgcaccaa acgctataca gatcctagct cgctgcgaaa acatgtcaag acagtgcatg
1201 gtcctgacgc ccatgtgacc aaacggcacc gtggggatgg ccccctgcct cgggcaccat
1261 ccatttctac agtggagccc aagagggagc gggaaggagg tcccatcagg gaggaaagca
1321 gactgactgt gccagagggt gccatgaagc cacagccaag ccctggggcc cagtcatcct
1381 gcagcagtga ccactccccg gcagggagtg cagccaatac agacagtggt gtggaaatga
1441 ctggcaatgc agggggcagc actgaagacc tctccagctt ggacgaggga ccttgcattg
1501 ctggcactgg tctgtccact cttcgccgcc ttgagaacct caggctggac cagctacatc
1561 aactccggcc aatagggacc cggggtctca aactgcccag cttgtcccac accggtacca
1621 ctgtgtcccg ccgcgtgggc cccccagtct ctcttgaacg ccgcagcagc agctccagca
1681 gcatcagctc tgcctatact gtcagccgcc gctcctccct ggcctctcct ttcccccctg
1741 gctccccacc agagaatgga gcatcctccc tgcctggcct tatgcctgcc cagcactacc
1801 tgcttcgggc aagatatgct tcagccagag ggggtggtac ttcgcccact gcagcatcca
1861 gcctggatcg gataggtggt cttcccatgc ctccttggag aagccgagcc gagtatccag
1921 gatacaaccc caatgcaggg gtcacccgga gggccagtga cccagcccag gctgctgacc
1981 gtcctgctcc agctagagtc cagaggttca agagcctggg ctgtgtccat accccaccca
2041 ctgtggcagg gggaggacag aactttgatc cttacctccc aacctctgtc tactcaccac
2101 agccccccag catcactgag aatgctgcca tggatgctag agggctacag gaagagccag
2161 aagttgggac ctccatggtg ggcagtggtc tgaaccccta tatggacttc ccacctactg
2221 atactctggg atatggggga cctgaagggg cagcagctga gccttatgga gcgaggggtc
2281 caggctctct gcctcttggg cctggtccac ccaccaacta tggccccaac ccctgtcccc
2341 agcaggcctc atatcctgac cccacccaag aaacatgggg tgagttccct tcccactctg
2401 ggctgtaccc aggccccaag gctctaggtg gaacctacag ccagtgtcct cgacttgaac
2461 attatggaca agtgcaagtc aagccagaac aggggtgccc agtggggtct gactccacag
2521 gactggcacc ctgcctcaat gcccacccca gtgaggggcc cccacatcca cagcctctct
2581 tttcccatta cccccagccc tctcctcccc aatatctcca gtcaggcccc tatacccagc
2641 caccccctga ttatcttcct tcagaaccca ggccttgcct ggactttgat tcccccaccc
2701 attccacagg gcagctcaag gctcagcttg tgtgtaatta tgttcaatct caacaggagc
2761 tactgtggga gggtgggggc agggaagatg cccccgccca ggaaccttcc taccagagtc
2821 ccaagtttct ggggggttcc caggttagcc caagccgtgc taaagctcca gtgaacacat
2881 atggacctgg ctttggaccc aacttgccca atcacaagtc aggttcctat cccacccctt
2941 caccatgcca tgaaaatttt gtagtggggg caaatagggc ttcacatagg gcagcagcac
3001 cacctcgact tctgccccca ttgcccactt gctatgggcc tctcaaagtg ggaggcacaa
3061 accccagctg tggtcatcct gaggtgggca ggctaggagg gggtcctgcc ttgtaccctc
3121 ctcccgaagg acaggtatgt aaccccctgg actctcttga tcttgacaac actcagctgg
3181 actttgtggc tattctggat gagccccagg ggctgagtcc tcctccttcc catgatcagc
3241 ggggcagctc tggacatacc ccacctccct ctgggccccc caacatggct gtgggcaaca
3301 tgagtgtctt actgagatcc ctacctgggg aaacagaatt cctcaactct agtgcctaaa
3361 gagtagggaa tctcatccat cacagatcgc atttcctaag gggtttctat ccttccagaa
3421 aaattggggg agctgcagtc ccctgcacaa gatgccccag ggatgggagg tatgggctgg
3481 gggctatgta tagtctgtat acgttttgag gagaaatttg ataatgacac tgtttcctga
3541 taataaagga actgcatcag aaaaaaaaaa aaaaaaaa
//