LOCUS BC012918 1766 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens gap junction protein, beta 3, 31kDa, mRNA (cDNA clone
MGC:21115 IMAGE:4500186), complete cds.
ACCESSION BC012918
VERSION BC012918.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1766)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1766)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54607055.
FEATURES Location/Qualifiers
source 1..1766
/db_xref="H-InvDB:HIT000036035"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21115 IMAGE:4500186"
/tissue_type="Bladder, transitional cell papilloma"
/clone_lib="NIH_MGC_93"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1766
/gene="GJB3"
/gene_synonym="CX31"
/gene_synonym="EKV"
/db_xref="GeneID:2707"
/db_xref="HGNC:HGNC:4285"
/db_xref="MIM:603324"
CDS 148..960
/gene="GJB3"
/gene_synonym="CX31"
/gene_synonym="EKV"
/codon_start=1
/product="gap junction protein, beta 3, 31kDa"
/protein_id="AAH12918.1"
/db_xref="GeneID:2707"
/db_xref="HGNC:HGNC:4285"
/db_xref="MIM:603324"
/translation="MDWKTLQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVW
GDEQKDFDCNTKQPGCTNVCYDNYFPISNIRLWALQLIFVTCPSLLVILHVAYREERE
RRHRQKHGDQCAKLYDNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPR
LVQCANVAPCPNIVDCYIARPTEKKIFTYFMVGASAVCIVLTICELCYLICHRVLRGL
HKDKPRGGCSPSSSASRASTCRCHHKLVEAGEVDPDPGNNKLQASAPNLTPI"
BASE COUNT 395 a 537 c 485 g 349 t
ORIGIN
1 gcaccctggt gggcagccat gggagtgtgt caggtggaag cagccgtcag ggtccctctc
61 tgctctctgt ccggacagac agggctccaa ccttcacttc agttcttgtg aactcccacc
121 aggtaggcac ggcccccacc aggcgccatg gactggaaga cactccaggc cctactgagc
181 ggtgtgaaca agtactccac agcgttcggg cgcatctggc tgtccgtggt gttcgtcttc
241 cgggtgctgg tatacgtggt ggctgcagag cgcgtgtggg gggatgagca gaaggacttt
301 gactgcaaca ccaagcagcc cggctgcacc aacgtctgct acgacaacta cttccccatc
361 tccaacatcc gcctctgggc cctgcagctc atcttcgtca catgcccctc gctgctggtc
421 atcctgcacg tggcctaccg tgaggagcgg gagcgccggc accgccagaa acacggggac
481 cagtgcgcca agctgtacga caacgcaggc aagaagcacg gaggcctgtg gtggacctac
541 ctgttcagcc tcatcttcaa gctcatcatt gagttcctct tcctctacct gctgcacact
601 ctctggcatg gcttcaatat gccgcgcctg gtgcagtgtg ccaacgtggc cccctgcccc
661 aacatcgtgg actgctacat tgcccgacct accgagaaga aaatcttcac ctacttcatg
721 gtgggcgcct ccgccgtctg catcgtactc accatctgtg agctctgcta cctcatctgc
781 cacagggtcc tgcgaggcct gcacaaggac aagcctcgag ggggttgcag cccctcgtcc
841 tccgccagcc gagcttccac ctgccgctgc caccacaagc tggtggaggc tggggaggtg
901 gatccagacc caggcaataa caagctgcag gcttcagcac ccaacctgac ccccatctga
961 ccacagggca ggggtggggc aacatgcggg ctgccaatgg gacatgcagg gcggtgtggc
1021 aggtggagag gtcctacagg ggctgagtga ccccactctg agttcactaa gttatgcaac
1081 tttcgttttg gcagatattt tttgacactg ggaactgggc tgtctagccg ggtataggta
1141 acccacaggc ccagtgccag ccctcaaagg acatagactt tgaaacaagc gaattaacta
1201 tctacgctgc ctgcaagggg ccacttaggg cactgctagc agggcttcaa ccaggaaggg
1261 atcaacccag gaagggatga tcaggagagg cttccctgag gacataatgt gtaagagagg
1321 tgagaagtgc tcccaagcag acacaacagc agcacagagg tctggaggcc acacaaaaag
1381 tgatgctcgc cctgggctag cctcagcaga cctaaggcat ctctactccc tccagaggag
1441 ccgcccagat tcctgcagtg gagaggaggt cttccagcag cagcaggtct ggagggctga
1501 gaatgaacct gactagaggt tctggagata cccagaggtc ccccaggtca tcacttggct
1561 cagtggaagc cctctttccc caaatcctac tccctcagcc tcaggcagtg gtgctcccat
1621 cttcctcccc acaactgtgc tcaggctggt gccagccttt cagaccctgc tcccagggac
1681 ttgggtggat gcgctgatag aacatcctca agacagtttc cttgaaatca ataaatactg
1741 tgttttatac aaaaaaaaaa aaaaaa
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