LOCUS BC012912 2231 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens acyl-Coenzyme A dehydrogenase, very long chain, mRNA
(cDNA clone MGC:21196 IMAGE:4471040), complete cds.
ACCESSION BC012912
VERSION BC012912.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2231)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2231)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: c Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557234.
FEATURES Location/Qualifiers
source 1..2231
/db_xref="H-InvDB:HIT000036030"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21196 IMAGE:4471040"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2231
/gene="ACADVL"
/gene_synonym="ACAD6"
/gene_synonym="LCACD"
/gene_synonym="VLCAD"
/db_xref="GeneID:37"
/db_xref="HGNC:HGNC:92"
/db_xref="MIM:609575"
CDS 77..2044
/gene="ACADVL"
/gene_synonym="ACAD6"
/gene_synonym="LCACD"
/gene_synonym="VLCAD"
/codon_start=1
/product="acyl-Coenzyme A dehydrogenase, very long chain"
/protein_id="AAH12912.1"
/db_xref="GeneID:37"
/db_xref="HGNC:HGNC:92"
/db_xref="MIM:609575"
/translation="MQAARMAASLGRQLLRLGGGSSRLTALLGQPRPGPARRPYAGGA
AQLALDKSDSHPSDALTRKKPAKAESKSFAVGMFKGQLTTDQVFPYPSVLNEEQTQFL
KELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQY
ARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTE
PSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVK
EKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAM
HILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYV
TESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVER
VLRDLRIFRIFEGTNDILRLFVALQGCMDKGKELSGLGSALKNPFGNAGLLLGEAGKQ
LRRRAGLGSGLSLSGLVHPELSRSGELAVRALEQFATVVEAKLIKHKKGIVNEQFLLQ
RLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSD
PWQQELYRNFKSISKALVERGGVVTSNPLGF"
BASE COUNT 497 a 586 c 700 g 448 t
ORIGIN
1 ggcgccagga cgtgggcgtg caggacgcca gagctgggtc agagctcgag ccagcggcgc
61 ccggagagat tcggagatgc aggcggctcg gatggccgcg agcttggggc ggcagctgct
121 gaggctcggg ggcggaagct cgcggctcac ggcgctcctg gggcagcccc ggcccggccc
181 tgcccggcgg ccctatgccg ggggtgccgc tcagctggct ctggacaagt cagattccca
241 cccctctgac gctctgacca ggaaaaaacc ggccaaggcg gaatctaagt cctttgctgt
301 gggaatgttc aaaggccagc tcaccacaga tcaggtgttc ccatacccgt ccgtgctcaa
361 cgaagagcag acacagtttc ttaaagagct ggtggagcct gtgtcccgtt tcttcgagga
421 agtgaacgat cccgccaaga atgacgctct ggagatggtg gaggagacca cttggcaggg
481 cctcaaggag ctgggggcct ttggtctgca agtgcccagt gagctgggtg gtgtgggcct
541 ttgcaacacc cagtacgccc gtttggtgga gatcgtgggc atgcatgacc ttggcgtggg
601 cattaccctg ggggcccatc agagcatcgg tttcaaaggc atcctgctct ttggcacaaa
661 ggcccagaaa gaaaaatacc tccccaagct ggcatctggg gagactgtgg ccgctttctg
721 tctaaccgag ccctcaagcg ggtcagatgc agcctccatc cgaacctctg ctgtgcccag
781 cccctgtgga aaatactata ccctcaatgg aagcaagctt tggatcagta atgggggcct
841 agcagacatc ttcacggtct ttgccaagac accagttaca gatccagcca caggagccgt
901 gaaggagaag atcacagctt ttgtggtgga gaggggcttc gggggcatta cccatgggcc
961 ccctgagaag aagatgggca tcaaggcttc aaacacagca gaggtgttct ttgatggagt
1021 acgggtgcca tcggagaacg tgctgggtga ggttgggagt ggcttcaagg ttgccatgca
1081 catcctcaac aatggaaggt ttggcatggc tgcggccctg gcaggtacca tgagaggcat
1141 cattgctaag gcggtagatc atgccactaa tcgtacccag tttggggaga aaattcacaa
1201 ctttgggctg atccaggaga agctggcacg gatggttatg ctgcagtatg taactgagtc
1261 catggcttac atggtgagtg ctaacatgga ccagggagcc acggacttcc agatagaggc
1321 cgccatcagc aaaatctttg gctcggaggc agcctggaag gtgacagatg aatgcatcca
1381 aatcatgggg ggtatgggct tcatgaagga acctggagta gagcgtgtgc tccgagatct
1441 tcgcatcttc cggatctttg aggggacaaa tgacattctt cggctgtttg tggctctgca
1501 gggctgtatg gacaaaggaa aggagctctc tgggcttggc agtgctctaa agaatccctt
1561 tgggaatgct ggcctcctgc taggagaggc aggcaaacag ctgaggcggc gggcagggct
1621 gggcagcggc ctgagtctca gcggacttgt ccacccggag ttgagtcgga gtggcgagct
1681 ggcagtacgg gctctggagc agtttgccac tgtggtggag gccaagctga taaaacacaa
1741 gaaggggatt gtcaatgaac agtttctgct gcagcggctg gcagacgggg ccatcgacct
1801 ctatgccatg gtggtggttc tctcgagggc ctcaagatcc ctgagtgagg gccaccccac
1861 ggcccagcat gagaaaatgc tctgtgacac ctggtgtatc gaggctgcag ctcggatccg
1921 agagggcatg gccgccctgc agtctgaccc ctggcagcaa gagctctacc gcaacttcaa
1981 aagcatctcc aaggccttgg tggagcgggg tggtgtggtc accagcaacc cacttggctt
2041 ctgaatactc ccggccaggg cctgtcccag ttatgtgcct tccctcaagc caaagccgaa
2101 gcccctttcc ttaaggccct ggtttgtccc gaaggggcct agtgttccca gcactgtgcc
2161 tgctctcaag agcacttact gcctcgcaaa taataaaaat ttctagccag tcaaacaaaa
2221 aaaaaaaaaa a
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