LOCUS BC012889 2384 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens amyloid beta (A4) precursor-like protein 1, mRNA (cDNA
clone MGC:9166 IMAGE:3865417), complete cds.
ACCESSION BC012889
VERSION BC012889.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2384)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2384)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: k Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 67782339.
FEATURES Location/Qualifiers
source 1..2384
/db_xref="H-InvDB:HIT000036017"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9166 IMAGE:3865417"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2384
/gene="APLP1"
/gene_synonym="APLP"
/db_xref="GeneID:333"
/db_xref="HGNC:HGNC:597"
/db_xref="MIM:104775"
CDS 70..2022
/gene="APLP1"
/gene_synonym="APLP"
/codon_start=1
/product="amyloid beta (A4) precursor-like protein 1"
/protein_id="AAH12889.1"
/db_xref="GeneID:333"
/db_xref="HGNC:HGNC:597"
/db_xref="MIM:104775"
/translation="MGPASPAARGLSRRPGQPPLPLLLPLLLLLLRAQPAIGSLAGGS
PGAAEAPGSAQVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPEL
QIARVEQATQAIPMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLH
QERMDQCESSTRRHQEAQEACSSQGLILHGSGMLLPCGSDRFRGVEYVCCPPPGTPDP
SGTAVGDPSTRSWPPGSRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSH
TLAVVGKVTPTPRPTDGVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAM
ADNQSKNLPKADRQALNEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAAL
EGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVH
THLQVIEERVNQSLGLLDQNPHLAQELRPQIQELLHSEHLGPSELEAPAPGGSSEDKG
GLQPPDSKDDTPMTLPKGSTEQDAASPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQ
RDELAPAGTGVSREAVSGLLIMGAGGGSLIVLSMLLLRRKKPYGAISHGVVEVDPMLT
LEEQQLRELQRHGYENPTYRFLEERP"
BASE COUNT 477 a 759 c 717 g 431 t
ORIGIN
1 gagctcctgt caccgctggg gccgggccgg gcgggagtgc aggggacgtg agggcgcaag
61 ggccgggaca tggggcccgc cagccccgct gctcgcggtc taagtcgccg cccgggccag
121 ccgccgctgc cgctgctgct gccactattg ctgctgcttc tgcgcgcgca gcccgccatc
181 gggagcctgg ccggtgggag ccccggcgcg gccgaggccc cggggtcggc ccaggtggct
241 ggactatgcg ggcgcctaac ccttcaccgg gacctgcgca ccggccgctg ggaaccagac
301 ccacagcgct ctcgacgctg tctccgggac ccgcagcgcg tgctggagta ctgcagacag
361 atgtacccgg agctgcagat tgcacgtgtg gagcaggcta cgcaggccat ccccatggag
421 cgctggtgcg ggggttcccg gagcggcagc tgcgcccacc cccaccacca ggttgtgccc
481 ttccgctgcc tgcctggtga atttgtgagt gaggccctgc tggtgcctga aggctgccgg
541 ttcttgcacc aggagcgcat ggaccaatgt gagagttcaa cccggaggca tcaggaggca
601 caggaggcct gcagctccca gggcctcatc ctgcacggct cgggcatgct cttaccctgt
661 ggctcggatc ggttccgtgg tgtggagtat gtgtgctgtc cccctccagg gacccccgac
721 ccatctggga cagcagttgg tgacccctcc acccggtcct ggcccccggg gagcagagta
781 gagggggctg aggacgagga agaggaggaa tccttcccac agccagtaga tgattacttc
841 gtggagcctc cgcaggctga agaggaagag gaaacggtcc cacccccaag ctcccataca
901 cttgcagtgg tcggcaaagt cactcccacc ccgaggccca cagacggtgt ggatatttac
961 tttggcatgc ctggggaaat cagtgagcac gaggggttcc tgagggccaa gatggacctg
1021 gaggagcgta ggatgcgcca gattaatgag gtgatgcgtg aatgggccat ggcagacaac
1081 cagtccaaga acctgcctaa agccgacaga caggccctga atgagcactt ccagtccatt
1141 ctgcagactc tggaggagca ggtgtctggt gagcgacagc gcctggtgga aacccacgcc
1201 acccgcgtca tcgcccttat caacgaccag cgccgggctg ccttggaggg cttcctggca
1261 gccctgcagg cagatccgcc tcaggcggag cgtgtcctgt tggccctgcg gcgctacctg
1321 cgtgcggagc agaaggaaca gaggcacacg ctgcgccact accagcatgt ggccgccgtg
1381 gatcccgaga aggcacagca gatgcgcttc caggtgcata cccaccttca agtgattgag
1441 gagagggtga atcagagcct gggcctgctt gaccagaacc cccacctggc tcaggagctg
1501 cggccccaaa tccaggaact cctccactct gaacacctgg gtcccagtga attggaagcc
1561 cctgcccctg ggggcagcag cgaggacaag ggtgggctgc agcctccaga ttccaaggat
1621 gacaccccca tgacccttcc aaaagggtcc acagaacaag atgctgcatc ccctgagaaa
1681 gagaagatga acccgctgga acagtatgag cgaaaggtga atgcgtctgt tccaaggggt
1741 ttccctttcc actcatcgga gattcagagg gatgagctgg caccagctgg gacaggggtg
1801 tcccgtgagg ctgtgtcggg tctgctgatc atgggagcgg gcggaggctc cctcatcgtc
1861 ctctccatgc tgctcctgcg caggaagaag ccctacgggg ctatcagcca tggcgtggtg
1921 gaggtggacc ccatgctgac cctggaggag cagcagctcc gcgaactgca gcggcacggc
1981 tatgagaacc ccacttaccg cttcctggag gaacgaccct gacccggccc ccttcacccc
2041 ttcagccgag cccagacctc ccctcttcct ggagccccag aaccccaact cccagcctag
2101 ggcagcaggg agtcttgaag tgatcatttc acaccctttt gtgagacggc tggaaattct
2161 tatttcccct ttccaattcc aaaattccat ccctaagaat tcccagatag tcccagcagc
2221 ctccccacgt ggcacctcct caccttaatt tattttttaa gtttatttat ggctctttaa
2281 ggtgaccgcc accttggtcc tagtgtctat tccctggaat tcaccctctc atgtttccct
2341 actaacatcc caataaagtc ctcttcccta aaaaaaaaaa aaaa
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