LOCUS BC012853 1128 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens glucosamine-6-phosphate deaminase 1, mRNA (cDNA clone
MGC:17146 IMAGE:3864091), complete cds.
ACCESSION BC012853
VERSION BC012853.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1128)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1128)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC012853.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: i Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281953.
FEATURES Location/Qualifiers
source 1..1128
/db_xref="H-InvDB:HIT000035997"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17146 IMAGE:3864091"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1128
/gene="GNPDA1"
/gene_synonym="GNPDA"
/gene_synonym="GPI"
/gene_synonym="HLN"
/gene_synonym="KIAA0060"
/db_xref="GeneID:10007"
/db_xref="HGNC:HGNC:4417"
/db_xref="MIM:601798"
CDS 6..875
/gene="GNPDA1"
/gene_synonym="GNPDA"
/gene_synonym="GPI"
/gene_synonym="HLN"
/gene_synonym="KIAA0060"
/codon_start=1
/product="glucosamine-6-phosphate deaminase 1"
/protein_id="AAH12853.1"
/db_xref="GeneID:10007"
/db_xref="HGNC:HGNC:4417"
/db_xref="MIM:601798"
/translation="MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGST
PLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPE
NTHILDGNAVDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVK
TLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEE
GVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKEKE
TEKSQSSKKPYSD"
BASE COUNT 333 a 247 c 286 g 262 t
ORIGIN
1 acaagatgaa gctcatcatc ctggagcact attctcaggc gagcgagtgg gcggctaaat
61 acatcaggaa ccgcatcatc cagtttaacc cagggccaga gaagtacttc accctggggc
121 tccccactgg gagtacccca cttggctgct acaagaagct gattgaatac tataagaatg
181 gggacctgtc ctttaaatat gtgaagacct tcaacatgga tgagtacgtg ggccttcctc
241 gagaccaccc ggagagttac cactccttca tgtggaacaa cttcttcaag cacattgaca
301 tccacccaga aaacacccac attctggatg ggaatgcagt cgacctacag gcagaatgtg
361 atgcctttga agagaagatc aaggctgcag gtgggatcga gctatttgtt ggaggcatcg
421 gccctgatgg acacattgcc ttcaacgagc caggctccag tctggtgtcc aggacccgtg
481 tgaagacgct ggccatggat accatcctgg ccaatgctag gttcttcgat ggagaactca
541 ccaaggtgcc caccatggcc ttgacggtgg gggtgggcac tgtcatggat gctagagagg
601 tgatgatcct tatcacaggt gctcacaagg catttgctct gtacaaggcc atcgaggagg
661 gagtgaacca catgtggacc gtgtctgcct tccagcagca tccccgcacc gtgtttgtgt
721 gtgacgagga tgccaccttg gagctgaaag tgaagactgt caagtatttc aaaggtttaa
781 tgcttgttca taacaagttg gtggacccct tgtacagtat caaagagaaa gaaactgaga
841 aaagccaatc ttcgaagaaa ccatacagcg attagcctgt gctgggacct agtgtcaagt
901 acccataggg aaaggcaggt ctttctggaa attgtcttta gaagaaagaa ttgtatttct
961 ttaatctagt atggttactc cagataagtg ggtgaactta ttgttcttgg ccatgaggct
1021 gggagcctag tcacggagtt tagctatagg gagaatgttt gtaacttaat cagaaaaaaa
1081 atatctgcaa aatgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//