LOCUS BC012597 1694 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin, alpha 1, skeletal muscle, mRNA (cDNA clone
MGC:13546 IMAGE:4291656), complete cds.
ACCESSION BC012597
VERSION BC012597.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1694)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1694)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47078293.
FEATURES Location/Qualifiers
source 1..1694
/db_xref="H-InvDB:HIT000035891"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13546 IMAGE:4291656"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1694
/gene="ACTA1"
/gene_synonym="ASMA"
/gene_synonym="CFTD"
/gene_synonym="CFTD1"
/gene_synonym="CFTDM"
/gene_synonym="MPFD"
/gene_synonym="NEM1"
/gene_synonym="NEM2"
/gene_synonym="NEM3"
/db_xref="GeneID:58"
/db_xref="HGNC:HGNC:129"
/db_xref="MIM:102610"
CDS 108..1241
/gene="ACTA1"
/gene_synonym="ASMA"
/gene_synonym="CFTD"
/gene_synonym="CFTD1"
/gene_synonym="CFTDM"
/gene_synonym="MPFD"
/gene_synonym="NEM1"
/gene_synonym="NEM2"
/gene_synonym="NEM3"
/codon_start=1
/product="actin, alpha 1, skeletal muscle"
/protein_id="AAH12597.1"
/db_xref="GeneID:58"
/db_xref="HGNC:HGNC:129"
/db_xref="MIM:102610"
/translation="MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQG
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEE
HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG
VTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKL
CYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGI
HETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
PERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF"
BASE COUNT 541 a 484 c 399 g 270 t
ORIGIN
1 ggggaccgca gcggacagcg ccaagtgaag cctcgcttcc ctcccgcggc gaccagggcc
61 cgagccgaga gtagcagttg tagctacccg cccagaaact agacacaatg tgcgacgaag
121 acgagaccac cgccctcgtg tgcgacaatg gctccggcct ggtgaaagcc ggcttcgccg
181 gggatgacgc ccctagggcc gtgttcccgt ccatcgtggg ccgcccccga caccagggcg
241 tcatggtcgg tatgggtcag aaagattcct acgtgggcga cgaggctcag agcaagagag
301 gtatcctgac cctgaagtac cctatcgagc acggcatcat caccaactgg gatgacatgg
361 agaagatctg gcaccacacc ttctacaacg agcttcgcgt ggctcccgag gagcacccca
421 ccctgctcac cgaggccccc ctcaatccca aggccaaccg cgagaagatg acccagatca
481 tgtttgagac cttcaacgtg cccgccatgt acgtggccat ccaggccgtg ctgtccctct
541 acgcctccgg caggaccacc ggcatcgtgc tggactccgg cgacggcgtc acccacaacg
601 tgcccattta tgagggctac gcgctgccgc acgccatcat gcgcctggac ctggcgggcc
661 gcgatctcac cgactacctg atgaagatcc tcactgagcg tggctactcc ttcgtgacca
721 cagctgagcg cgagatcgtg cgcgacatca aggagaagct gtgctacgtg gccctggact
781 tcgagaacga gatggcgacg gccgcctcct cctcctccct ggaaaagagc tacgagctgc
841 cagacgggca ggtcatcacc atcggcaacg agcgcttccg ctgcccggag acgctcttcc
901 agccctcctt catcggtatg gagtcggcgg gcattcacga gaccacctac aacagcatca
961 tgaagtgtga catcgacatc aggaaggacc tgtatgccaa caacgtcatg tcggggggca
1021 ccacgatgta ccctgggatc gctgaccgca tgcagaaaga gatcaccgcg ctggcaccca
1081 gcaccatgaa gatcaagatc atcgccccgc cggagcgcaa atactcggtg tggatcggcg
1141 gctccatcct ggcctcgctg tccaccttcc agcagatgtg gatcaccaag caggagtacg
1201 acgaggccgg cccttccatc gtccaccgca aatgcttcta gacacactcc acctccagca
1261 cgcgacttct caggacgacg aatcttctca atgggggggc ggctgagctc cagccacccc
1321 gcagtcactt tctttgtaac aacttccgtt gctgccatcg taaactgaca cagtgtttat
1381 aacgtgtaca tacattaact tattacctca ttttgttatt tttcgaaaca aagccctgtg
1441 gaagaaaatg gaaaacttga agaagcatta aagtcattct gttaagctgc gaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaa
//