LOCUS BC012593 1348 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hydroxysteroid (11-beta) dehydrogenase 1, mRNA (cDNA
clone MGC:13539 IMAGE:4286028), complete cds.
ACCESSION BC012593
VERSION BC012593.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1348)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1348)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32455237.
FEATURES Location/Qualifiers
source 1..1348
/db_xref="H-InvDB:HIT000035888"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13539 IMAGE:4286028"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1348
/gene="HSD11B1"
/gene_synonym="11-beta-HSD1"
/gene_synonym="11-DH"
/gene_synonym="HDL"
/gene_synonym="HSD11L"
/gene_synonym="MGC13539"
/db_xref="GeneID:3290"
/db_xref="HGNC:HGNC:5208"
/db_xref="MIM:600713"
CDS 102..980
/gene="HSD11B1"
/gene_synonym="11-beta-HSD1"
/gene_synonym="11-DH"
/gene_synonym="HDL"
/gene_synonym="HSD11L"
/gene_synonym="MGC13539"
/codon_start=1
/product="hydroxysteroid (11-beta) dehydrogenase 1"
/protein_id="AAH12593.1"
/db_xref="GeneID:3290"
/db_xref="HGNC:HGNC:5208"
/db_xref="MIM:600713"
/translation="MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASK
GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQF
VAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ
SNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI
DTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKIL
EFLYSTSYNMDRFINK"
BASE COUNT 404 a 284 c 308 g 352 t
ORIGIN
1 ggggacaatt cagaggctgc tgcctgctta ggaggttgta gaaagctctg taggttctct
61 ctgtgtgtcc tacaggagtc ttcaggccag ctccctgtcg gatggctttt atgaaaaaat
121 atctcctccc cattctgggg ctcttcatgg cctactacta ctattctgca aacgaggaat
181 tcagaccaga gatgctccaa ggaaagaaag tgattgtcac aggggccagc aaagggatcg
241 gaagagagat ggcttatcat ctggcgaaga tgggagccca tgtggtggtg acagcgaggt
301 caaaagaaac tctacagaag gtggtatccc actgcctgga gcttggagca gcctcagcac
361 actacattgc tggcaccatg gaagacatga ccttcgcaga gcaatttgtt gcccaagcag
421 gaaagctcat gggaggacta gacatgctca ttctcaacca catcaccaac acttctttga
481 atctttttca tgatgatatt caccatgtgc gcaaaagcat ggaagtcaac ttcctcagtt
541 acgtggtcct gactgtagct gccttgccca tgctgaagca gagcaatgga agcattgttg
601 tcgtctcctc tctggctggg aaagtggctt atccaatggt tgctgcctat tctgcaagca
661 agtttgcttt ggatgggttc ttctcctcca tcagaaagga atattcagtg tccagggtca
721 atgtatcaat cactctctgt gttcttggcc tcatagacac agaaacagcc atgaaggcag
781 tttctgggat agtccatatg caagcagctc caaaggagga atgtgccctg gagatcatca
841 aagggggagc tctgcgccag gaagaagtgt attatgacag ctcactctgg accactcttc
901 tgatcagaaa tccatgcagg aagatcctgg aatttctcta ctcaacgagc tataatatgg
961 acagattcat aaacaagtag gaactccctg agggctgggc atgctgaggg attttgggac
1021 tgttctgtct catgtttatc tgagctctta tctatgaaga catcttccca gagtgtcccc
1081 agagacatgc aagtcatggg tcacacctga caaatggaag gagttcctct aacatttgca
1141 aaatggaaat gtaataataa tgaatgtcat gcaccgctgc agccagcagt tgtaaaattg
1201 ttagtaaaca taggtataat taccagatag ttatattaaa tttatatctt atatataata
1261 atatgtgatg attaatacaa tattaattat aataaaggtc acataaactt tataaatcca
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//