LOCUS BC012570 2250 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens palmdelphin, mRNA (cDNA clone MGC:13440
IMAGE:4245261), complete cds.
ACCESSION BC012570
VERSION BC012570.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2250)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2250)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: g Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16306484.
FEATURES Location/Qualifiers
source 1..2250
/db_xref="H-InvDB:HIT000035878"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13440 IMAGE:4245261"
/tissue_type="Skeletal Muscle"
/clone_lib="NIH_MGC_81"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2250
/gene="PALMD"
/gene_synonym="FLJ20271"
/gene_synonym="PALML"
/db_xref="GeneID:54873"
/db_xref="HGNC:HGNC:15846"
/db_xref="MIM:610182"
CDS 259..1914
/gene="PALMD"
/gene_synonym="FLJ20271"
/gene_synonym="PALML"
/codon_start=1
/product="palmdelphin"
/protein_id="AAH12570.1"
/db_xref="GeneID:54873"
/db_xref="HGNC:HGNC:15846"
/db_xref="MIM:610182"
/translation="MEEAELVKGRLQAITDKRKIQEEISQKRLKIEEDKLKHQHLKKK
ALREKWLLDGISSGKEQEEMKKQNQQDQHQIQVLEQSILRLEKEIQDLEKAELQISTK
EEAILKKLKSIERTTEDIIRSVKVEREERAEESIEDIYANIPDLPKSYIPSRLRKEIN
EEKEDDEQNRKALYAMEIKVEKDLKTGESTVLSSIPLPSDDFKGTGIKVYDDGQKSVY
AVSSNHSAAYNGTDGLAPVEVEELLRQASERNSKSPTEYHEPVYANPFYRPTTPQRET
VTPGPNFQERIKIKTNGLGIGVNESIHNMGNGLSEERGNNFNHISPIPPVPHPRSVIQ
QAEEKLHTPQKRLMTPWEESNVMQDKDAPSPKPRLSPRETIFGKSEHQNSSPTCQEDE
EDVRYNIVHSLPPDINDTEPVTMIFMGYQQAEDSEEDKKFLTGYDGIIHAELVVIDDE
EEEDEGEAEKPSYHPIAPHSQVYQPAKPTPLPRKRSEASPHENTNHKSPHKNSISLKE
QEESLGSPVHHSPFDAQTTGDGTEDPSLTALRMRMAKLGKKVI"
BASE COUNT 799 a 466 c 480 g 505 t
ORIGIN
1 ggggagtcaa ctcatgccag cagcctcagc gtctgcctcc ccagcacacc ctcattacat
61 gtgtctgtct ggcctgatct gtgcatctgc tcggagacgc tcctgacaag tcgggaattt
121 ctctatttct ccactggtgc aaagagcgga tttctccctg cttctcttct gtcacccccg
181 ctcctctccc ccaggaggct ccttgattta tggtagcttt ggacttgctt ccccgtctga
241 ctgtccttga cttctagaat ggaagaagct gagctggtga agggaagact ccaggccatc
301 acagataaaa gaaaaataca ggaagaaatc tcacagaagc gtctgaaaat agaggaagac
361 aaactaaagc accagcattt gaagaaaaag gccttgaggg agaaatggct tctagatgga
421 atcagcagcg gaaaagaaca ggaagagatg aagaagcaaa atcaacaaga ccagcaccag
481 atccaggttc tagaacaaag tatcctcagg cttgagaaag agatccaaga tcttgaaaaa
541 gctgaactgc aaatctcaac gaaggaagag gccattttaa agaaactaaa gtcaattgag
601 cggacaacag aagacattat aagatctgtg aaagtggaaa gagaagaaag agcagaagag
661 tcaattgagg acatctatgc taatatccct gaccttccaa agtcctacat accttctagg
721 ttaaggaagg agataaatga agaaaaagaa gatgatgaac aaaataggaa agctttatat
781 gccatggaaa ttaaagttga aaaagacttg aagactggag aaagtacagt tctgtcttca
841 atacctctgc catcagatga ctttaaaggt acaggaataa aagtttatga tgatgggcaa
901 aagtcagtgt atgcagtaag ttctaatcac agtgcagcat acaatggcac cgatggcctg
961 gcaccagttg aagtagagga acttctaaga caagcctcag agagaaactc taaatcccca
1021 acagagtatc atgagcctgt atatgccaat cccttttaca ggcctacaac cccacagaga
1081 gaaacggtga cccctggacc aaactttcaa gaaaggataa agattaaaac taatggactg
1141 ggtattggtg taaatgaatc catacacaat atgggcaatg gtctttcaga ggaaagggga
1201 aacaacttca atcacatcag tcccattccg ccagtgcctc atccccgatc agtgattcaa
1261 caagcagaag agaagcttca caccccgcaa aaaaggctaa tgactccttg ggaagaatcg
1321 aatgtcatgc aggacaaaga tgcaccctct ccaaagccaa ggctgagccc cagagagaca
1381 atatttggga aatctgaaca ccagaattct tcacccactt gtcaggagga cgaggaagat
1441 gtcagatata atatcgttca ttccctgcct ccagacataa atgatacaga accggtgaca
1501 atgattttca tggggtatca gcaggcagaa gacagtgaag aagataagaa gtttctgaca
1561 ggatatgatg ggatcatcca tgctgagctg gttgtgattg atgatgagga ggaggaggat
1621 gaaggagaag cagagaaacc gtcctaccac cccatagctc cccatagtca ggtgtaccag
1681 ccagccaaac caacaccact tcctagaaaa agatcagaag ctagtcctca tgaaaacaca
1741 aatcataaat ccccccacaa aaattccata tctctgaaag agcaagaaga aagcttaggc
1801 agccctgtcc accattcccc atttgatgct cagacaactg gagatgggac tgaggatcca
1861 tccttaacag ctttaaggat gagaatggca aagctgggaa aaaaggtgat ctaagagttg
1921 taccacctat ataaacatcc tttgaagaag aaactaagaa gcatttgcaa atttctcttc
1981 tggatatttt gtttattttt tctgaagtcc aaaaaattat cattacagtg taccatatta
2041 agccatgtga ataagtagta gtcattattt gtgaaaaatt cccaaaaagc tggggaaaac
2101 aaatgtgtaa cttttccagt tacttgacac gattcagtgg gggaaaacca gcatttttta
2161 ttctattgat accaaagcat ttctaataag agcttgttaa atttaagaat aaagttattt
2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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