LOCUS BC012509 798 bp mRNA linear HUM 06-JAN-2005
DEFINITION Homo sapiens eukaryotic translation elongation factor 1 alpha 1,
mRNA (cDNA clone IMAGE:3875059), partial cds.
ACCESSION BC012509
VERSION BC012509.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 798)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 798)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone grew slowly and was rescued by PCR.
FEATURES Location/Qualifiers
source 1..798
/db_xref="H-InvDB:HIT000087883"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3875059"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..798
/gene="EEF1A1"
/gene_synonym="EEF-1"
/gene_synonym="EEF1A"
/gene_synonym="eEF1A-1"
/gene_synonym="EF-Tu"
/gene_synonym="EF1A"
/gene_synonym="GRAF-1EF"
/gene_synonym="HNGC:16303"
/gene_synonym="LENG7"
/gene_synonym="MGC16224"
/gene_synonym="PTI1"
/db_xref="GeneID:1915"
/db_xref="MIM:130590"
CDS <1..486
/gene="EEF1A1"
/gene_synonym="EEF-1"
/gene_synonym="EEF1A"
/gene_synonym="eEF1A-1"
/gene_synonym="EF-Tu"
/gene_synonym="EF1A"
/gene_synonym="GRAF-1EF"
/gene_synonym="HNGC:16303"
/gene_synonym="LENG7"
/gene_synonym="MGC16224"
/gene_synonym="PTI1"
/codon_start=1
/product="EEF1A1 protein"
/protein_id="AAH12509.1"
/db_xref="GeneID:1915"
/db_xref="MIM:130590"
/translation="ALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVI
ILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVD
MVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKA
K"
BASE COUNT 235 a 153 c 189 g 221 t
ORIGIN
1 gctcttcctg gggacaatgt gggcttcaat gtcaagaatg tgtctgtcaa ggatgttcgt
61 cgtggcaacg ttgctggtga cagcaaaaat gacccaccaa tggaagcagc tggcttcact
121 gctcaggtga ttatcctgaa ccatccaggc caaataagcg ccggctatgc ccctgtattg
181 gattgccaca cggctcacat tgcatgcaag tttgctgagc tgaaggaaaa gattgatcgc
241 cgttctggta aaaagctgga agatggccct aaattcttga agtctggtga tgctgccatt
301 gttgatatgg ttcctggcaa gcccatgtgt gttgagagct tctcagacta tccacctttg
361 ggtcgctttg ctgttcgtga tatgagacag acagttgcgg tgggtgtcat caaagcagtg
421 gacaagaagg ctgctggagc tggcaaggtc accaagtctg cccagaaagc tcagaaggct
481 aaatgaatat tatccctaat acctgccacc ccactcttaa tcagtggtgg aagaacggtc
541 tcagaactgt ttgtttcaat tggccattta agtttagtag taaaagactg gttaatgata
601 acaatgcatc gtaaaacctt cagaaggaaa ggagaatgtt ttgtggacca ctttggtttt
661 cttttttgcg tgtggcagtt ttaagttatt agtttttaaa atcagtactt tttaatggaa
721 acaacttgac caaaaatttg tcacagaatt ttgagaccca ttaaaaaagt taaatgaaaa
781 aaaaaaaaaa aaaaaaaa
//