LOCUS BC012361 2242 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens distal-less homeobox 3, mRNA (cDNA clone MGC:20483
IMAGE:4647487), complete cds.
ACCESSION BC012361
VERSION BC012361.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2242)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2242)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327640.
FEATURES Location/Qualifiers
source 1..2242
/db_xref="H-InvDB:HIT000035780"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20483 IMAGE:4647487"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2242
/gene="DLX3"
/gene_synonym="TDO"
/db_xref="GeneID:1747"
/db_xref="HGNC:HGNC:2916"
/db_xref="MIM:600525"
CDS 206..1069
/gene="DLX3"
/gene_synonym="TDO"
/codon_start=1
/product="distal-less homeobox 3"
/protein_id="AAH12361.1"
/db_xref="GeneID:1747"
/db_xref="HGNC:HGNC:2916"
/db_xref="MIM:600525"
/translation="MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESSVTDLGYYS
APQHDYYSGQPYGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGASYRQYGAYREQP
LPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERA
ELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDT
SSHSTPAPARSQLPPPLPYSASPSYLDDPTNSWYHAQNLSGPHLQQQPPQPATLHHAS
PGPPPNPGAVY"
BASE COUNT 485 a 757 c 565 g 435 t
ORIGIN
1 acgcgaggag aggcgcgcag cgaccgcctg acggcaggca atggtgtaag cgcctctcgg
61 cctccccctc cccccagacg cggccgggtc ctcccttcgc cttctggaca cacacccctg
121 cctcgtctct tccgcctctc ttgcactccg gtccgttcct gtcctctgcg gaggccagcc
181 ctggggaggt gcagcgcccg ccaggatgag tggctccttc gatcgcaagc tcagcagcat
241 cctcaccgac atctccagct cccttagctg ccatgcgggc tccaaggact cgcctaccct
301 gcccgagtct tctgtcactg acctgggcta ctacagcgct ccccagcacg attactactc
361 gggccagccc tatggccaga cggtgaaccc ctacacctac caccaccaat tcaatctcaa
421 tgggcttgca ggcacgggcg cttactcgcc caagtcggaa tatacctacg gagcctccta
481 ccggcaatac ggggcgtatc gggagcagcc gctgccagcc caggacccag tgtcggtgaa
541 ggaggagccg gaagcagagg tgcgcatggt gaatgggaag cccaagaagg tccgaaagcc
601 gcgtacaatc tactccagct accagctggc cgccctgcag cgccgcttcc agaaggccca
661 gtacctggcg ctgcccgagc gcgccgagct ggccgcgcag ctgggcctca cgcagacaca
721 ggtgaaaatc tggttccaga accgccgttc caagttcaag aaactctaca agaacgggga
781 ggtgccgctg gagcacagtc ccaataacag tgattccatg gcctgcaact caccaccatc
841 acccgccctc tgggacacct cttcccactc cactccggcc cctgcccgca gtcagctgcc
901 cccgccgctc ccatacagtg cctcccccag ctacctggac gaccccacca actcctggta
961 tcacgcacag aacctgagtg gaccccactt acagcagcag ccgcctcagc cagccaccct
1021 gcaccatgcc tctcccgggc ccccgcccaa ccctggggct gtgtactgag cacccatctg
1081 gcctgcaccc ttgacaaagg accccaggac caggcagaag gcgcctccgt cctagccact
1141 caggaatcat cgaggagcac agggaaaagg aactcccttt ccccctccct tgccccttcc
1201 tccagggacc caagcgcttc cagatgacat ttgcatggac caaggatgcc ccctgaacct
1261 ccctccctct gcctagacac tggggtaccc ctccagatgt ggggacattc caccccagtg
1321 gggacagcca ttcccctacc tgctccagga gcctggattg gctttaaatg gctcatcatc
1381 ttccagcttc ttaaacttag tgcctgttcc cagactggag accttgggat gggggagagt
1441 gtggagggtt tgcgggtcct gcctgtgctg gggcacctgg caccgtggat cttaaaactt
1501 gccaggccta gttcctcctg agcctctggt ggtctccccc tgctcgagcg gcccctcggc
1561 caataagaca gtggacatca tgacgaggac tccgggtggg gacctgaact ggtcaccgcc
1621 ctgcacttct agccctcatt taagatttga gggtgaaacc aaagaaaacc ccctaagtga
1681 gggaatcttt taatatttgt ggctttagag gaaagaacta aaggagccat ctctctcccc
1741 tctcctccgt tccgagagga ggggtgggtc tcagacgttt ttcctatgga cttatttctt
1801 ccatgtccag gactttgcac aactttggtt ttaaaagctg ttgaaaaata ggaaaacaaa
1861 gggcattgtt cacagatagg gccaagtctc cccttgcaag ggtgcctctg ttctgtccct
1921 gcccccacct caccttctct actcctccag taagttggca gttttggtgc caaaccccaa
1981 atctccaaag agacatacca ggcaagacaa acccccaaac acctcctttc cggtggcctt
2041 ggaaacagat tgctccgagc tggagaatgt cgggtgaggt gtatgggaga ggaggggaga
2101 gttagaactt gtgcctttgg gagtaagggg taactgcctg gagggctggt ggcactgccc
2161 ctccctgacc cagacatccc accaaagcta actttccccc acccctgatg cagtaaaaca
2221 ttgaaaaaaa aaaaaaaaaa aa
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