LOCUS BC012295 2813 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lamin B1, mRNA (cDNA clone MGC:5168 IMAGE:3445475),
complete cds.
ACCESSION BC012295
VERSION BC012295.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2813)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2813)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27436949.
FEATURES Location/Qualifiers
source 1..2813
/db_xref="H-InvDB:HIT000035744"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5168 IMAGE:3445475"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2813
/gene="LMNB1"
/gene_synonym="LMN"
/gene_synonym="LMN2"
/gene_synonym="LMNB"
/db_xref="GeneID:4001"
/db_xref="HGNC:HGNC:6637"
/db_xref="MIM:150340"
CDS 285..2045
/gene="LMNB1"
/gene_synonym="LMN"
/gene_synonym="LMN2"
/gene_synonym="LMNB"
/codon_start=1
/product="lamin B1"
/protein_id="AAH12295.1"
/db_xref="GeneID:4001"
/db_xref="HGNC:HGNC:6637"
/db_xref="MIM:150340"
/translation="MATATPVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLA
VYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYETELADARRALDDTARERAK
LQIELGKCKAEHDQLLLNYAKKESDLNGAQIKLREYEAALNSKDAALATALGDKKSLE
GDLEDLKDQIAQLEASLAAAKKQLADETLLKVDLENRCQSLTEDLEFRKSMYEEEINE
TRRKHETRLVEVDSGRQIEYEYKLAQALHEMREQHDAQVRLYKEELEQTYHAKLENAR
LSSEMNTSTVNSAREELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDN
SRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLQGEEERLKLSP
SPSSRVTVSRASSSRSVRTTRGKRKRVDVEESEASSSVSISHSASATGNVCIEEIDVD
GKFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTAS
PPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTVFKTTIPEEEEEEEEAAGVVVE
EELFHQQGTPRASNRSCAIM"
BASE COUNT 785 a 595 c 728 g 705 t
ORIGIN
1 gcattttccc gcgtgcgtgt gtgagtgggt gtgtgtgttt tcttacaaag ggtatttcgc
61 gatcgatcga ttgattcgta gttccccccc gcgcgccttt gccctttgtg ctgtaatcga
121 gctcccgcca tcccaggtgc ttctccgttc ctctaaacgc cagcgtctgg acgtgagcgc
181 aggtcgccgg tttgtgcctt cggtccccgc ttcgccccct gccgtcccct ccttatcacg
241 gtcccgctcg cggcctcgcc gccccgctgt ctccgccgcc cgccatggcg actgcgaccc
301 ccgtgccgcc gcggatgggc agccgcgctg gcggccccac cacgccgctg agccccacgc
361 gcctgtcgcg gctccaggag aaggaggagc tgcgcgagct caatgaccgg ctggcggtgt
421 acatcgacaa ggtgcgcagc ctggagacgg agaacagcgc gctgcagctg caggtgacgg
481 agcgcgagga ggtgcgcggc cgtgagctca ccggcctcaa ggcgctctac gagaccgagc
541 tggccgacgc gcgacgcgcg ctcgacgaca cggcccgcga gcgcgccaag ctgcagatcg
601 agctgggcaa gtgcaaggcg gaacacgacc agctgctcct caactatgct aagaaggaat
661 ctgatcttaa tggcgcccag atcaagcttc gagaatatga agcagcactg aattcgaaag
721 atgcagctct tgctactgca cttggtgaca aaaaaagttt agagggagat ttggaggatc
781 tgaaggatca gattgcccag ttggaagcct ccttagctgc agccaaaaaa cagttagcag
841 atgaaacttt acttaaagta gatttggaga atcgttgtca gagccttact gaggacttgg
901 agtttcgcaa aagcatgtat gaagaggaga ttaacgagac cagaaggaag catgaaacgc
961 gcttggtaga ggtggattct gggcgtcaaa ttgagtatga gtacaagctg gcgcaagccc
1021 ttcatgagat gagagagcaa catgatgccc aagtgaggct gtataaggag gagctggagc
1081 agacttacca tgccaaactt gagaatgcca gactgtcatc agagatgaat acttctactg
1141 tcaacagtgc cagggaagaa ctgatggaaa gccgcatgag aattgagagc ctttcatccc
1201 agctttctaa tctacagaaa gagtctagag catgtttgga aaggattcaa gaattagagg
1261 acttgcttgc taaagaaaaa gacaactctc gtcgcatgct gacagacaaa gagagagaga
1321 tggcggaaat aagggatcaa atgcagcaac agctgaatga ctatgaacag cttcttgatg
1381 taaagttagc cctggacatg gaaatcagtg cttacaggaa actcttacaa ggcgaagaag
1441 agaggttgaa gctgtctcca agcccttctt cccgtgtgac agtatcccga gcatcctcaa
1501 gtcgtagtgt acgtacaact agaggaaagc ggaagagggt tgatgtggaa gaatcagagg
1561 cgagtagtag tgttagcatc tctcattccg cctcagccac tggaaatgtt tgcatcgaag
1621 aaattgatgt tgatgggaaa tttatccgct tgaagaacac ttctgaacag gatcaaccaa
1681 tgggaggctg ggagatgatc agaaaaattg gagacacatc agtcagttat aaatatacct
1741 caagatatgt gctgaaggca ggccagactg ttacaatttg ggctgcaaac gctggtgtca
1801 cagccagccc cccaactgac ctcatctgga agaaccagaa ctcgtggggc actggcgaag
1861 atgtgaaggt tatattgaaa aattctcagg gagaggaggt tgctcaaaga agtacagtct
1921 ttaaaacaac catacctgaa gaagaggagg aggaggaaga agcagctgga gtggttgttg
1981 aggaagaact tttccaccag cagggaaccc caagagcatc caatagaagc tgtgcaatta
2041 tgtaaaattt tcaactgtct tcctcaaaat aaagaagtat ggtaatcctt acctgtatac
2101 agtgcagagc cttctcagaa gcacagaata tttttatatt tcctttatgt gaatttttaa
2161 gctgcaaatc tgatggcctt aatttccttt ttgacactga aagttttgta aaagaaatca
2221 tgtccataca ctttgttgca agatgtgaat tattgacact gaacttaata actgtgtact
2281 gttcggaagg ggttcctcaa attttttgac tttttttgta tgtgtgtttt ttcttttttt
2341 ttaagttctt atgaggaggg gagggtaaat aaaccactgt gcgtcttggt gtaatttgaa
2401 gattgcccca tctagactag caatctcttc attattctct gctatatata aaacggtgct
2461 gtgagggagg ggaaaagcat ttttcaatat attgaacttt tgtactgaat ttttttgtaa
2521 taagcaatca aggttataat tttttttaaa atagaaattt tgtaagaagg caatattaac
2581 ctaatcacca tgtaagcact ctggatgatg gattccacaa aacttggttt tatggttact
2641 tcttctctta gattcttaat tcatgaggag ggtgggggag ggaggtggag ggagggaagg
2701 gtttctctat taaaatgcat tcgttgtgtt ttttaagata gtgtaacttg cttaaatttc
2761 ttatgtgaca ttaacaaata aaaaagctct tttaatatga aaaaaaaaaa aaa
//