LOCUS BC012172 2975 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens acyl-CoA synthetase short-chain family member 2, mRNA
(cDNA clone MGC:20418 IMAGE:4643236), complete cds.
ACCESSION BC012172
VERSION BC012172.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2975)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2975)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21269869.
FEATURES Location/Qualifiers
source 1..2975
/db_xref="H-InvDB:HIT000035711"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20418 IMAGE:4643236"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2975
/gene="ACSS2"
/gene_synonym="AceCS"
/gene_synonym="ACS"
/gene_synonym="ACSA"
/gene_synonym="dJ1161H23.1"
/gene_synonym="MYH7B"
/db_xref="GeneID:55902"
/db_xref="HGNC:HGNC:15814"
/db_xref="MIM:605832"
CDS 45..2150
/gene="ACSS2"
/gene_synonym="AceCS"
/gene_synonym="ACS"
/gene_synonym="ACSA"
/gene_synonym="dJ1161H23.1"
/gene_synonym="MYH7B"
/codon_start=1
/product="acyl-CoA synthetase short-chain family member 2"
/protein_id="AAH12172.1"
/db_xref="GeneID:55902"
/db_xref="HGNC:HGNC:15814"
/db_xref="MIM:605832"
/translation="MGLPEERVRSGSGSRGQEEAGAGGRARSWSPPPEVSRSAHVPSL
QRYRELHRRSVEEPREFWGDIAKEFYWKTPCPGPFLRYNFDVTKGKIFIEWMKGATTN
ICYNVLDRNVHEKKLGDKVAFYWEGNEPGETTQITYHQLLVQVCQFSNVLRKQGIQKG
DRVAIYMPMIPELVVAMLACARIGALHSIVFAGFSSESLCERILDSSCSLLITTDAFY
RGEKLVNLKELADEALQKCQEKGFPVRCCIVVKHLGRAELGMGDSTSQSPPIKRSCPD
VQISWNQGIDLWWHELMQEAGDECEPEWCDAEDPLFILYTSGSTGKPKGVVHTVGGYM
LYVATTFKYVFDFHAEDVFWCTADIGWITGHSYVTYGPLANGATSVLFEGIPTYPDVN
RLWSIVDKYKVTKFYTAPTAIRLLMKFGDEPVTKHSRASLQVLGTVGEPINPEAWLWY
HRVVGAQRCPIVDTFWQTETGGHMLTPLPGATPMKPGSATFPFFGVAPAILNESGEEL
EGEAEGYLVFKQPWPGIMRTVYGNHERFETTYFKKFPGYYVTGDGCQRDQDGYYWITG
RIDDMLNVSGHLLSTAEVESALVEHEAVAEAAVVGHPHPVKGECLYCFFTLCDGHTFS
PKLTEELKKQIREKIGPIATPDYIQNAPGLPKTRSGKIMRRVLRKIAQNDHDLGDMST
VADPSVISHLFSHRCLTIQ"
BASE COUNT 741 a 766 c 794 g 674 t
ORIGIN
1 cgccgcgacc gcaaaggcgg ccgcggttct aggaacttga cgtgatgggg cttcctgagg
61 agcgggtccg gagcggcagc gggagccggg gccaggagga agctggagcc ggaggccggg
121 cgcggagttg gtctccgccg cccgaggtca gccgctccgc gcacgtcccc tcgctgcagc
181 gctaccgcga gctgcaccgg cgctccgtgg aggagccgcg ggaattctgg ggagacattg
241 ccaaggaatt ttactggaag actccatgcc ctggcccatt ccttcggtac aactttgatg
301 tgactaaagg gaaaatcttt attgagtgga tgaaaggagc aactaccaac atctgctaca
361 atgtactgga tcgaaatgtc catgagaaaa agcttggaga taaagttgct ttttactggg
421 agggcaatga gccaggggag accactcaga tcacatacca tcagcttctg gtccaagtgt
481 gtcagttcag caatgttctc cgaaaacagg gcattcagaa gggggaccga gtggccatct
541 acatgcctat gatcccagag cttgtggtgg ccatgctggc atgtgcccgc attggggctt
601 tgcactccat tgtgtttgca ggcttctctt cagagtctct atgtgaacgg atcttggatt
661 ccagctgcag tcttctcatc actacagatg ccttctacag gggggaaaag cttgtgaacc
721 tgaaggagct ggctgacgag gccctgcaga agtgtcagga gaagggtttc ccagtaagat
781 gctgcattgt ggtcaagcac ctggggcggg cagagctcgg catgggtgac tccaccagcc
841 agtccccccc aattaagagg tcatgcccag atgtgcagat ctcatggaac caagggattg
901 acttgtggtg gcatgagctc atgcaagagg caggggatga gtgtgagccc gagtggtgtg
961 atgccgagga cccactcttc atcctgtaca ccagtggctc cacaggcaaa cccaagggtg
1021 tggttcacac agttgggggc tacatgctct atgtagccac aaccttcaag tatgtgtttg
1081 acttccatgc agaggatgtg ttctggtgca cggcagacat tggttggatc actggtcatt
1141 cctacgtcac ctatgggcca ctggccaatg gtgccaccag tgttttgttt gaggggattc
1201 ccacatatcc ggacgtgaac cgcctgtgga gcattgtgga caaatacaag gtgaccaagt
1261 tctacacagc acccacagcc atccgtctgc tcatgaagtt tggagatgag cctgtcacca
1321 agcatagccg ggcatccttg caggtgttag gcacagtggg tgaacccatc aaccctgagg
1381 cctggctatg gtaccaccgg gtggtaggtg cccagcgctg ccccatcgtg gacaccttct
1441 ggcaaacaga gacaggtggc cacatgttga ctccccttcc tggtgccaca cccatgaaac
1501 ccggttctgc tactttccca ttctttggtg tagctcctgc aatcctgaat gagtccgggg
1561 aagagttgga aggtgaagct gaaggttatc tggtgttcaa gcagccctgg ccagggatca
1621 tgcgcacagt ctatgggaac cacgaacgct ttgagacaac ctactttaag aagtttcctg
1681 gatactatgt tacaggagat ggctgccagc gggaccagga tggctattac tggatcactg
1741 gcaggattga tgacatgctc aatgtatctg gacacctgct gagtacagca gaggtggagt
1801 cagcacttgt ggaacatgag gctgttgcag aggcagctgt ggtgggccac cctcatcctg
1861 tgaagggtga atgcctctac tgctttttca ccttgtgtga tggccacacc ttcagcccca
1921 agctcaccga ggagctcaag aagcagatta gagaaaagat tggccccatt gccacaccag
1981 actacatcca gaatgcacct ggcttgccta aaacccgctc agggaaaatc atgaggcgag
2041 tgcttcggaa gattgctcag aatgaccatg acctcgggga catgtctact gtggctgacc
2101 catctgtcat cagtcacctc ttcagccacc gctgcctgac catccagtga acatgatcct
2161 gacctttacc taggattcct cctgctccaa actttgccca tcctctttgc cccctcagga
2221 gtgctgaggg ccagtgttga cccacactac cctcccttga ccagctgtct gggaccggaa
2281 accagctttg tctccaggta gagacaacat cctgtgactg ccaggcagaa aggacagggc
2341 ccaggtcagc ctcagtctgc tgtgcctcca gactgcagag ctctcagaac ccagaacaga
2401 gacgaaaagg ctacctctcc tacccaagtt aagtgttcaa aggggatgtg agggcctcca
2461 ctgaagcagg gaggcagctg tgtaatccta tgtcagctct cttaggaagc cccagtactt
2521 atattgggca tgcacttgcc cttaaaaaca atgatttgtg agtccaggaa caatttacta
2581 tttttaaaat attttgctgc ttctgttctg ggtctgaatt cccttttgtg ccagatgcca
2641 gtactgtctg cccattggct ccaggggctg tatgggcaga ttcagtctcc agagggtatt
2701 cagatcatct gcttctttga aggagtaaat gtgttttgtt cctagggcca gaggagcttg
2761 tcttccttgt cctctgttcc caccctcccc tgaacagaac ccagcccata agagacattc
2821 tcagatgaaa ctctgttttc ttgccccagt caggctcaag ccctgtggtt gtaggaataa
2881 agcctgtgat ctccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//