LOCUS BC012147 3626 bp mRNA linear HUM 26-APR-2004
DEFINITION Homo sapiens junctional adhesion molecule 3, mRNA (cDNA clone
MGC:20361 IMAGE:4552285), complete cds.
ACCESSION BC012147
VERSION BC012147.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3626)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3626)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: b Column: 3.
FEATURES Location/Qualifiers
source 1..3626
/db_xref="H-InvDB:HIT000258948"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20361 IMAGE:4552285"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3626
/gene="JAM3"
/gene_synonym="FLJ14529"
/db_xref="GeneID:83700"
/db_xref="MIM:606871"
CDS 1..933
/gene="JAM3"
/gene_synonym="FLJ14529"
/codon_start=1
/product="JAM3 protein"
/protein_id="AAH12147.1"
/db_xref="GeneID:83700"
/db_xref="MIM:606871"
/translation="MALRRPPRLRLCARLPDFFLLLLFRGCLIGAVNLKSSNRTPVVQ
EFESVELSCIITDSQTSDPRIEWKKIQDEQTTYVFFDNKIQGDLAGRAEILGKTSLKI
WNVTRRDSALYRCEVVARNDRKEIDEIVIELTVQVKPVTPVCRVPKAVPVGKMATLHC
QESEGHPRPHYSWYRNDVPLPTDSRANPRFRNSSFHLNSETGTLVFTAVHKDDSGQYY
CIASNDAGSARCEEQEMEVYDLNIGGIIGGVLVVLAVLALITLGICCAYRRGYFINNK
QDGESYKNPGKPDGVNYIRTDEEGDFRHKSSFVI"
misc_feature 115..408
/gene="JAM3"
/gene_synonym="FLJ14529"
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
misc_feature 418..699
/gene="JAM3"
/gene_synonym="FLJ14529"
/note="IGcam; Region: Immunoglobulin domain cell adhesion
molecule (cam) subfamily"
/db_xref="CDD:cd00931"
BASE COUNT 1037 a 818 c 842 g 929 t
ORIGIN
1 atggcgctga ggcggccacc gcgactccgg ctctgcgctc ggctgcctga cttcttcctg
61 ctgctgcttt tcaggggctg cctgataggg gctgtaaatc tcaaatccag caatcgaacc
121 ccagtggtac aggaatttga aagtgtggaa ctgtcttgca tcattacgga ttcgcagaca
181 agtgacccca ggatcgagtg gaagaaaatt caagatgaac aaaccacata tgtgtttttt
241 gacaacaaaa ttcagggaga cttggcgggt cgtgcagaaa tactggggaa gacatccctg
301 aagatctgga atgtgacacg gagagactca gccctttatc gctgtgaggt cgttgctcga
361 aatgaccgca aggaaattga tgagattgtg atcgagttaa ctgtgcaagt gaagccagtg
421 acccctgtct gtagagtgcc gaaggctgta ccagtaggca agatggcaac actgcactgc
481 caggagagtg agggccaccc ccggcctcac tacagctggt atcgcaatga tgtaccactg
541 cccacggatt ccagagccaa tcccagattt cgcaattctt ctttccactt aaactctgaa
601 acaggcactt tggtgttcac tgctgttcac aaggacgact ctgggcagta ctactgcatt
661 gcttccaatg acgcaggctc agccaggtgt gaggagcagg agatggaagt ctatgacctg
721 aacattggcg gaattattgg gggggttctg gttgtccttg ctgtactggc cctgatcacg
781 ttgggcatct gctgtgcata cagacgtggc tacttcatca acaataaaca ggatggagaa
841 agttacaaga acccagggaa accagatgga gttaactaca tccgcactga cgaggagggc
901 gacttcagac acaagtcatc gtttgtgatc tgagacccgc ggtgtggctg agagcgcaca
961 gagcgcacgt gcacatacct ctgctagaaa ctcctgtcaa ggcagcgaga gctgatgcac
1021 tcggacagag ctagacactc attcagaagc ttttcgtttt ggccaaagtt gaccactact
1081 cttcttactc taacaagcca catgaataga agaattttcc tcaagatgga cccggtaaat
1141 ataaccacaa ggaagcgaaa ctgggtgcgt tcactgagtt gggttcctaa tctgtttctg
1201 gcctgattcc cgcatgagta ttagggtgat cttaaagagt ttgctcacgt aaacgcccgt
1261 gctgggccct gtgaagccag catgttcacc actggtcgtt cagcagccac gacagcacca
1321 tgtgagatgg cgaggtggct ggacagcacc agcagcgcat cccggcggga acccagaaaa
1381 ggcttcttac acagcagcct tacttcatcg gcccacagac accaccgcag tttcttctta
1441 aaggctctgc tgatcggtgt tgcagtgtcc attgtggaga agctttttgg atcagcattt
1501 tgtaaaaaca accaaaatca ggaaggtaaa ttggttgctg gaagagggat cttgcctgag
1561 gaaccctgct tgtccaacag ggtgtcagga tttaaggaaa accttcgtct taggctaagt
1621 ctgaaatggt actgaaatat gcttttctat gggtcttgtt tattttataa aattttacat
1681 ctaaattttt gctaaggatg tattttgatt attgaaaaga aaatttctat ttaaactgta
1741 aatatattgt catacaatgt taaataacct atttttttaa aaaagttcaa cttaaggtag
1801 aagttccaag ctactagtgt taaattggaa aatatcaata attaagagta ttttacccaa
1861 ggaatcctct catggaagtt tactgtgatg ttccttttct cacacaagtt ttagcctttt
1921 tcacaaggga actcatactg tctacacatc agaccatagt tgcttaggaa acctttaaaa
1981 attccagtta agcaatgttg aaatcagttt gcatctcttc aaaagaaacc tctcaggtta
2041 gctttgaact gcctcttcct gagatgacta ggacagtcgg tacccagagg ccacccagaa
2101 gccctcagat gtacatacac agatgccagt cagctcctgg ggttgcgcca ggcgcccccg
2161 ctctagctca ctgttgcctc gctgtctgcc aggaggccct gccatccttg ggccctggca
2221 gtggctgtgt cccagtgagc tttactcacg tggcccttgc ttcatccagc acagctctca
2281 ggtgggcact gcagggacac tggtgtcttc catgtagcgt cccagctttg ggctcctgta
2341 acagacctct ttttggttat ggatggctca caaaataggg cccccaatgc tatttttttt
2401 tttaagtttg tttaattatt tgttaagatt gtctaaggcc aaaggcaatt gcgaaatcaa
2461 gtctgtcaag tacaataaca tttttaaaag aaaatggatc ccactgttcc tctttgccac
2521 agagaaagca cccagacgcc acaggctctg tcgcatttca aaacaaacca tgatggagtg
2581 gcggccagtc cagcctttta aagaacgtca ggtggagcag ccaggtgaaa ggcctggcgg
2641 ggaggaaagt gaaacgcctg aatcaaaagc agttttctaa ttttgacttt aaatttttca
2701 tccgccggag acactgctcc catttgtggg gggacattag caacatcact cagaagcctg
2761 tgttcttcaa gagcaggtgt tctcagcctc acatgccctg ccgtgctgga ctcaggactg
2821 aagtgctgta aagcaaggag ctgctgagaa ggagcactcc actgtgtgcc tggagaatgg
2881 ctctcactac tcaccttgtc tttcagcttc cagtgtcttg ggttttttat actttgacag
2941 ctttttttta attgcataca tgagactgtg ttgacttttt ttagttatgt gaaacacttt
3001 gccgcaggcc gcctggcaga ggcaggaaat gctccagcag tggctcagtg ctccctggtg
3061 tctgctgcat ggcatcctgg atgcttagca tgcaagttcc ctccatcatt gccaccttgg
3121 tagagaggga tggctcccca ccctcagcgt tggggattca cgctccagcc tccttcttgg
3181 ttgtcatagt gatagggtag ccttattgcc ccctcttctt ataccctaaa accttctaca
3241 ctagtgccat gggaaccagg tctgaaaaag tagagagaag tgaaagtaga gtctgggaag
3301 tagctgccta taactgagac tagacggaaa aggaatactc gtgtatttta agatatgaat
3361 gtgactcaag actcgaggcc gatacgaggc tgtgattctg cctttggatg gatgttgctg
3421 tacacagatg ctacagactt gtactaacac accgtaattt ggcatttgtt taacctcatt
3481 tataaaagct tcaaaaaaac ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa aaaaaaaaaa aaaaaa
//