LOCUS BC012134 1631 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens translocase of outer mitochondrial membrane 40 homolog
(yeast), mRNA (cDNA clone MGC:20224 IMAGE:4549825), complete cds.
ACCESSION BC012134
VERSION BC012134.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1631)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1631)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: b Column: 16.
FEATURES Location/Qualifiers
source 1..1631
/db_xref="H-InvDB:HIT000035683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20224 IMAGE:4549825"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1631
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/db_xref="GeneID:10452"
/db_xref="HGNC:HGNC:18001"
/db_xref="MIM:608061"
CDS 56..1141
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/codon_start=1
/product="translocase of outer mitochondrial membrane 40
homolog (yeast)"
/protein_id="AAH12134.1"
/db_xref="GeneID:10452"
/db_xref="HGNC:HGNC:18001"
/db_xref="MIM:608061"
/translation="MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSL
GAGTSTSRSSERTPGAATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVK
LTVNKGLSNHFQVNHTVALSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSL
NAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILV
AHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYH
KASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPP
LPLTLALGAFLNHRKNKFQCGFGLTIG"
BASE COUNT 332 a 527 c 502 g 270 t
ORIGIN
1 cacggggtgg gagcggagcc caggccggga gcaggcgccg ccgccacagg cgaccatggg
61 gaacgtgttg gctgccagct cgccgcccgc agggccgcca ccgccgcctg cgccggccct
121 cgtggggctg ccgccacctc cgccctcgcc gccgggcttc acgctgccgc cgctgggagg
181 cagcctgggc gccggcacca gtacgagtcg aagttcggaa cggacccccg gggctgcaac
241 cgccagcgcc tcaggggccg ccgaggatgg ggcctgcggc tgcctgccca acccgggcac
301 attcgaggag tgccaccgga agtgcaagga gctgtttccc attcagatgg agggtgtcaa
361 gctcacagtc aacaaagggt tgagtaacca ttttcaggtc aaccacacag tagccctcag
421 cacaatcggg gagtccaact accacttcgg ggtcacatat gtggggacaa agcagctgag
481 tcccacagag gcgttccctg tactggtggg tgacatggac aacagtggca gtctcaacgc
541 tcaggtcatt caccagctgg gccccggtct caggtccaag atggccatcc agacccagca
601 gtcgaagttt gtgaactggc aggtggacgg ggagtatcgg ggctctgact tcacagcagc
661 cgtcaccctg gggaacccag acgtcctcgt gggttcagga atcctcgtag cccactacct
721 ccagagcatc acgccttgcc tggccctggg tggagagctg gtctaccacc ggcggcctgg
781 agaggagggc actgtcatgt ctctagctgg gaaatacaca ttgaacaact ggttggcaac
841 ggtaacgttg ggccaggcgg gcatgcacgc aacatactac cacaaagcca gtgaccagct
901 gcaggtgggt gtggagtttg aggccagcac aaggatgcag gacaccagcg tctccttcgg
961 gtaccagctg gacctgccca aggccaacct cctcttcaaa ggctctgtgg atagcaactg
1021 gatcgtgggt gccacgctgg agaagaagct cccacccctg cccctgacac tggcccttgg
1081 ggccttcctg aatcaccgca agaacaagtt tcagtgtggc tttggcctca ccatcggctg
1141 agccctcctg gcccccgcct tccacgccct tccgattcca cctccacctc cacctccccc
1201 tgccacagag gggagacctg agcccccctc ccttccctcc ccccttgggg gtcggggggg
1261 acattggaaa ggagggaccc cgccacccca gcagctgagg aggggattct ggaactgaat
1321 ggcgcttcgg gattctgagt agcaggggca gcatgcccag tgggcctggg gtcccgggag
1381 ggattccgga attgaggggc acgcaggatt ctgagcacca ggggcagagg cggccagaca
1441 acctcaggga ggagtgtcct ggcgtcccca tcctccaaag ggcctgggcc cgccccgagg
1501 gggcagcgag aggagcttcc ccatccccgg tcagtccacc ctgccccgtc cactttccca
1561 tctcctcggt ataaatcatg tttataagtt atggaagaac cgggacattt tacaaaaaaa
1621 aaaaaaaaaa a
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