LOCUS BC012126 1233 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens claudin 14, mRNA (cDNA clone MGC:20195 IMAGE:4684949),
complete cds.
ACCESSION BC012126
VERSION BC012126.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1233)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1233)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: p Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21536295.
FEATURES Location/Qualifiers
source 1..1233
/db_xref="H-InvDB:HIT000035679"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20195 IMAGE:4684949"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1233
/gene="CLDN14"
/db_xref="GeneID:23562"
/db_xref="HGNC:HGNC:2035"
/db_xref="MIM:605608"
CDS 143..862
/gene="CLDN14"
/codon_start=1
/product="claudin 14"
/protein_id="AAH12126.1"
/db_xref="GeneID:23562"
/db_xref="HGNC:HGNC:2035"
/db_xref="MIM:605608"
/translation="MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAV
SYLKGLWMECVWHSTGIYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGM
KCTRCAKGTPAKTTFAILGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEI
GQALYLGFISSSLSLIGGTLLCLSCQDEAPYRPYQAPPRATTTTANTAPAYQPPAAYK
DNRAPSVTSATHSGYRLNDYV"
BASE COUNT 259 a 375 c 340 g 259 t
ORIGIN
1 gtttgcttca ccttctgcca ggattgtaag tttcctgagg cctccccagt cctgcggaac
61 tggctccggc tggcacctga ggagcggcgt gaccccgagg gcccagggag ctgcccggct
121 ggcctaggca ggcagccgca ccatggccag cacggccgtg cagcttctgg gcttcctgct
181 cagcttcctg ggcatggtgg gcacgttgat caccaccatc ctgccgcact ggcggaggac
241 agcgcacgtg ggcaccaaca tcctcacggc cgtgtcctac ctgaaagggc tctggatgga
301 gtgtgtgtgg cacagcacag gcatctacca gtgccagatc taccgatccc tgctggcgct
361 gccccaagac ctccaggctg cccgcgccct catggtcatc tcctgcctgc tctcgggcat
421 agcctgcgcc tgcgccgtca tcgggatgaa gtgcacgcgc tgcgccaagg gcacacccgc
481 caagaccacc tttgccatcc tcggcggcac cctcttcatc ctggccggcc tcctgtgcat
541 ggtggccgtc tcctggacca ccaacgacgt ggtgcagaac ttctacaacc cgctgctgcc
601 cagcggcatg aagtttgaga ttggccaggc cctgtacctg ggcttcatct cctcgtccct
661 ctcgctcatt ggtggcaccc tgctttgcct gtcctgccag gacgaggcac cctacaggcc
721 ctaccaggcc ccgcccaggg ccaccacgac cactgcaaac accgcacctg cctaccagcc
781 accagctgcc tacaaagaca atcgggcccc ctcagtgacc tcggccacgc acagcgggta
841 caggctgaac gactacgtgt gagtccccac agcctgcttc tcccctgggc tgctgtgggc
901 tgggtccccg gcgggactgt caatggaggc aggggttcca gcacaaagtt tacttctggg
961 caatttttgt atccaaggaa ataatgtgaa tgcgaggaaa tgtctttaga gcacagggac
1021 agagggggaa ataagaggag gagaaagctc tctataccaa agactgaaaa aaaaaatcct
1081 gtctgttttt gtatttatta tatatattta tgtgggtgat ttgataacaa gtttaatata
1141 aagtgacttg ggagtttggt cagtggggtt ggtttgtgat ccaggaataa accttgcgga
1201 tgtggctgtt tatgaaaaaa aaaaaaaaaa aaa
//