LOCUS BC012098 2891 bp mRNA linear HUM 07-AUG-2008
DEFINITION Homo sapiens glucan (1,4-alpha-), branching enzyme 1, mRNA (cDNA
clone MGC:20071 IMAGE:4574938), complete cds.
ACCESSION BC012098
VERSION BC012098.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2891)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2891)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557618.
FEATURES Location/Qualifiers
source 1..2891
/db_xref="H-InvDB:HIT000035657"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20071 IMAGE:4574938"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2891
/gene="GBE1"
/gene_synonym="GBE"
/db_xref="GeneID:2632"
/db_xref="HGNC:HGNC:4180"
/db_xref="MIM:607839"
CDS 213..2321
/gene="GBE1"
/gene_synonym="GBE"
/codon_start=1
/product="glucan (1,4-alpha-), branching enzyme 1"
/protein_id="AAH12098.1"
/db_xref="GeneID:2632"
/db_xref="HGNC:HGNC:4180"
/db_xref="MIM:607839"
/translation="MAAPMTPAARPEDYEAALNAALADVPELARLLEIDPYLKPYAVD
FQRRYKQFSQILKNIGENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTG
DFNGWNPFSYPYKKLDYGKWELYIPPKQNKSVLVPHGSKLKVVITSKSGEILYRISPW
AKYVVREGDNVNYDWIHWDPEHSYEFKHSRPKKPRSLRIYESHVGISSHEGKVASYKH
FTCNVLPRIKGLGYNCIQLMAIMEHAYYASFGYQITSFFAASSRYGSPEELQELVDTA
HSMGIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEV
LRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGVGQGFSGDYSEYFGLQVDEDALTY
LMLANHLVHTLCPDSITIAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEF
KDEDWNMGDIVYTLTNRRYLEKCIAYAESHDQALVGDKSLAFWLMDAEMYTNMSVLTP
FTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQ
FHLTDDDLLRYKFLNNFDRDMNRLEERYGWLAAPQAYVSEKHEGNKIIAFERAGLLFI
FNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSEAFEHNGRPYS
LLVYIPSRVALILQNVDLPN"
BASE COUNT 811 a 578 c 663 g 839 t
ORIGIN
1 gctcctcccc gctggcgggg ggagaaaggg caggaggcct tccgtcccgg ctataaaggg
61 ccccggaccg ccgcggctcg cctcggcttg cctcgacacg cctaggcgcc ctccggctcc
121 gccctagccg ccgcgtccca gctagagctc cagcgcccgc tcaggcccca ctcgaccctc
181 tcgggcctcg gctacttgga ctgcggcgga atatggcggc tccgatgact cccgcggctc
241 ggcccgagga ctacgaggcg gcgctcaatg ccgccctggc tgacgtgccc gaactggcca
301 gactcctgga gatcgacccg tacttgaagc cctacgccgt ggacttccag cgcaggtata
361 agcagtttag ccaaattttg aagaacattg gagaaaatga aggtggtatt gataagtttt
421 ccagaggcta tgaatcattt ggcgtccaca gatgtgctga tggtggttta tactgcaaag
481 aatgggcccc gggagcagaa ggagtttttc ttactggaga ttttaatggt tggaatccat
541 tttcgtaccc atacaaaaaa ctggattatg gaaaatggga gctgtatatc ccaccaaagc
601 agaataaatc tgtactcgtg cctcatggat ccaaattaaa ggtagttatt actagtaaaa
661 gcggagagat cttgtatcgt atttcaccgt gggcaaagta tgtggttcgt gaaggtgata
721 atgtgaatta tgattggata cactgggatc cagaacactc atatgagttt aagcattcca
781 gaccaaagaa gccacggagt ctaagaattt atgaatctca tgtgggaatt tcttcccatg
841 aaggaaaagt agcttcttat aaacatttta catgcaatgt actaccaaga atcaaaggcc
901 ttggatacaa ctgcattcag ttgatggcaa tcatggagca tgcttactat gccagctttg
961 gttaccaaat cacaagcttc tttgcagctt ccagccgtta tggatcacct gaagagctac
1021 aagaactggt agacacagct cattccatgg gtatcatagt cctcttagat gtggtacaca
1081 gccatgcttc aaaaaattca gcagatggat tgaatatgtt tgatgggaca gattcctgtt
1141 attttcattc tggacctaga gggactcatg atctttggga tagcagattg tttgcctact
1201 ccagctggga agttttaaga ttccttctgt caaacataag atggtggttg gaagaatatc
1261 gctttgatgg atttcgtttt gatggtgtta cgtccatgct ttatcatcac catggagtgg
1321 gtcaaggttt ctcaggtgat tacagtgaat atttcggact acaagtagat gaagatgcct
1381 tgacttacct catgttggca aatcatttgg ttcacacgct gtgtcccgat tctataacaa
1441 tagctgagga tgtatcagga atgccagctc tgtgctctcc aatttcccag ggagggggtg
1501 gttttgacta tcgactagcc atggcaattc cagataagtg gattcagcta cttaaagagt
1561 ttaaagatga agactggaac atgggcgata tagtatacac gctcacaaac aggcgctacc
1621 ttgaaaagtg cattgcttat gcagagagcc atgatcaggc attggttggg gataagtcgc
1681 tggcattttg gttgatggat gccgaaatgt atacaaacat gagtgtcctg actcctttta
1741 ctccagttat tgatcgtgga atacagcttc ataaaatgat tcgactcatt acgcatgggc
1801 ttggtggaga aggctatctc aatttcatgg gtaatgaatt tgggcatcct gaatggttag
1861 acttcccaag aaaaggaaat aatgagagtt accattatgc caggcggcag tttcatttaa
1921 ctgacgacga ccttcttcgc tacaagttcc taaataattt tgacagggat atgaatagat
1981 tggaagaaag atatggttgg cttgcagctc cacaggccta cgtgagtgaa aaacatgaag
2041 gcaataagat cattgctttt gaaagagcag gtcttctttt cattttcaac ttccatccaa
2101 gcaagagcta cactgactac cgagttggaa cagcattgcc agggaaattc aaaattgtgc
2161 tagattcaga tgcagcggaa tatggagggc atcagagact ggaccacagc actgactttt
2221 tttctgaggc ttttgaacat aatgggcgtc cctattctct tttggtgtac attccaagca
2281 gagtggccct catccttcag aatgtggatc tgccgaattg aagaggcctg atttcagctc
2341 caccagatgc agatttgtgt tttgttttct tgttatcact gtcacacagc ttataacatg
2401 tatgcttttc agaatacagt tgtctagcca agccatcaag tgtctgaaat tcaatattgg
2461 tttatgcaaa tacagcaaac ttttatttaa gtagatagga gaatatgttt aaaatattag
2521 gaatcctaga ccatattttc aagtcatctt agcagctagg attctcaaat ggaagtgtta
2581 tatataatat gttaaaaaca ttttgctttc ctggctaatt atttgatcct tttaaattca
2641 aatttgaatc atttgtcatg tatgattatt tctgttaaat gtacacagta tttaagatgg
2701 atatttggtg gctctatttg ttctgatatc ttttggtcta aattatgagg taccaagatt
2761 gtttctttgt ttcttttttt caaattgtgt ttagaaatac tgtaataaat atgcagtagt
2821 gatataaaga attatatcca aggtaatata aaagccatta cgtatgaact caaaaaaaaa
2881 aaaaaaaaaa a
//