LOCUS BC012091 1222 bp mRNA linear HUM 17-MAY-2005
DEFINITION Homo sapiens hairy and enhancer of split 2 (Drosophila), mRNA (cDNA
clone IMAGE:4634002), complete cds.
ACCESSION BC012091
VERSION BC012091.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1222)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1222)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: i Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1222
/db_xref="H-InvDB:HIT000035651"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4634002"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1222
/gene="HES2"
/db_xref="GeneID:54626"
CDS 217..447
/gene="HES2"
/codon_start=1
/product="HES2 protein"
/protein_id="AAH12091.1"
/db_xref="GeneID:54626"
/translation="MGLPRRAGDAAELRKSLKPLLEKRRRARINQSLSQLKGLILPLL
GREDASGWHTWLPLHAQNCFLLYIQAPEQPPA"
BASE COUNT 289 a 327 c 352 g 254 t
ORIGIN
1 cgcggggaca ctcgtgcgac tggggcaagg tgcccagggg cttctctcct aatttgcctc
61 acgtaacagt tgagacccca gagggcagca aaactgggtt cgaattggag agccgtccag
121 gcacagacaa attcattcat ctgcccagtg cccgctaact gcggttccag gcgccggcga
181 cgcaattcca gagctgccac cgcttccccg cggagcatgg ggctgcctcg ccgggcaggg
241 gacgcggcgg agctgcgcaa gagcctgaag ccgctgctgg agaagcgccg gcgcgcgcgc
301 atcaaccaga gcctgagcca gcttaagggg ctcatcctgc cgctgctggg ccgggaggat
361 gcttctggct ggcacacctg gcttcccctc catgctcaga actgcttcct actctacatc
421 caggctcctg agcagccccc agcttaagct tcagcagctc cagggtaaat ccatctccgc
481 ccagagctga ctccggatct gccccagtga caataacaag ataaatgcct tccattctct
541 tcgtacttac aggatgtaat ccacatattt acacagtgtt tcatttgcgg taatgtttgt
601 tttgtttctt gttccttcgt acctatctgg gaagcctgtg caattcagat gtccaggccc
661 acttccagaa gttctcattc cctgtgcttg agtcaatggc cgcagaccat acacctgaga
721 gcaagttaat ctgctctaac aaagatatca catctaagaa tggtggttgg caggggctgg
781 ggggtgggaa gaatggggag ttggtgcttc atgggtacag agattcagtt ttgcaagagg
841 aaaagagctc tggagatgga tgctgctgat ggctacaccg caatgtgaat gtgcatgatg
901 cttaaatatg gttaagatgg gccgggcgcg gtggctcacg cctgtaatcc cagcactttg
961 ggaggccgag gcgggcagat cacgaggtca ggagatcgag accatcttgg ctaacacggt
1021 gaaaccccat ctctactata aatacaaaaa attagccggg cgtgggggcg ggcacctgtg
1081 gtcccagcta ctcgggaggc tgaggcagga gaatggcatg aacctgggag gtggagcttg
1141 cagtgagccg agatcacgcc actgcactcc aggctgggcg acagagcgag actccgtctc
1201 aaaaaaaaaa aaaaaaaaaa aa
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