LOCUS BC012009 1500 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens mitogen-activated protein kinase kinase 6, mRNA (cDNA
clone MGC:21331 IMAGE:4499772), complete cds.
ACCESSION BC012009
VERSION BC012009.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: e Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14589899.
FEATURES Location/Qualifiers
source 1..1500
/db_xref="H-InvDB:HIT000035599"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21331 IMAGE:4499772"
/tissue_type="Bladder, transitional cell papilloma"
/clone_lib="NIH_MGC_93"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1500
/gene="MAP2K6"
/gene_synonym="MAPKK6"
/gene_synonym="MEK6"
/gene_synonym="MKK6"
/gene_synonym="SAPKK3"
/db_xref="GeneID:5608"
/db_xref="HGNC:HGNC:6846"
/db_xref="MIM:601254"
CDS 199..1203
/gene="MAP2K6"
/gene_synonym="MAPKK6"
/gene_synonym="MEK6"
/gene_synonym="MKK6"
/gene_synonym="SAPKK3"
/codon_start=1
/product="mitogen-activated protein kinase kinase 6"
/protein_id="AAH12009.1"
/db_xref="GeneID:5608"
/db_xref="HGNC:HGNC:6846"
/db_xref="MIM:601254"
/translation="MSQSKGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQ
NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI
SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV
SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP
YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP
QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLILGD
"
BASE COUNT 465 a 312 c 341 g 382 t
ORIGIN
1 cactttccag tctgttttgc aaggtgtgca tttccatctt gattccctga aagtccatct
61 gctgcatcgg tcaagagaaa ctccacttgc atgaagattg cacgcctgca gcttgcatct
121 ttgttgcaaa actagctaca gaagagaagc aaggcaaagt cttttgtgct cccctccccc
181 atcaaaggaa aggggaaaat gtctcagtcg aaaggcaaga agcgaaaccc tggccttaaa
241 attccaaaag aagcatttga acaacctcag accagttcca caccacctcg agatttagac
301 tccaaggctt gcatttctat tggaaatcag aactttgagg tgaaggcaga tgacctggag
361 cctataatgg aactgggacg aggtgcgtac ggggtggtgg agaagatgcg gcacgtgccc
421 agcgggcaga tcatggcagt gaagcggatc cgagccacag taaatagcca ggaacagaaa
481 cggctactga tggatttgga tatttccatg aggacggtgg actgtccatt cactgtcacc
541 ttttatggcg cactgtttcg ggagggtgat gtgtggatct gcatggagct catggataca
601 tcactagata aattctacaa acaagttatt gataaaggcc agacaattcc agaggacatc
661 ttagggaaaa tagcagtttc tattgtaaaa gcattagaac atttacatag taagctgtct
721 gtcattcaca gagacgtcaa gccttctaat gtactcatca atgctctcgg tcaagtgaag
781 atgtgcgatt ttggaatcag tggctacttg gtggactctg ttgctaaaac aattgatgca
841 ggttgcaaac catacatggc ccctgaaaga ataaacccag agctcaacca gaagggatac
901 agtgtgaagt ctgacatttg gagtctgggc atcacgatga ttgagttggc catccttcga
961 tttccctatg attcatgggg aactccattt cagcagctca aacaggtggt agaggagcca
1021 tcgccacaac tcccagcaga caagttctct gcagagtttg ttgactttac ctcacagtgc
1081 ttaaagaaga attccaaaga acggcctaca tacccagagc taatgcaaca tccatttttc
1141 accctacatg aatccaaagg aacagatgtg gcatcttttg taaaactgat tcttggagac
1201 taaaaagcag tggacttaat cggttgaccc tactgtggat tggtgggttt cggggtgaag
1261 caagttcact acagcatcaa tagaaagtca tctttgagat aatttaaccc tgcctctcag
1321 agggttttct ctcccaattt tctttttact ccccctctta agggggcctt ggaatctata
1381 gtatagaatg aactgtctag atggatgaat tatgataaag gcttaggact tcaaaaggtg
1441 attaaatatt taatgatgtg tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//