LOCUS BC011988 1186 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD9 molecule, mRNA (cDNA clone MGC:9067
IMAGE:3860667), complete cds.
ACCESSION BC011988
VERSION BC011988.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1186)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1186)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21237762.
FEATURES Location/Qualifiers
source 1..1186
/db_xref="H-InvDB:HIT000035585"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9067 IMAGE:3860667"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1186
/gene="CD9"
/gene_synonym="5H9"
/gene_synonym="BA2"
/gene_synonym="BTCC-1"
/gene_synonym="DRAP-27"
/gene_synonym="GIG2"
/gene_synonym="MRP-1"
/gene_synonym="P24"
/gene_synonym="TSPAN29"
/db_xref="GeneID:928"
/db_xref="HGNC:HGNC:1709"
/db_xref="MIM:143030"
CDS 52..738
/gene="CD9"
/gene_synonym="5H9"
/gene_synonym="BA2"
/gene_synonym="BTCC-1"
/gene_synonym="DRAP-27"
/gene_synonym="GIG2"
/gene_synonym="MRP-1"
/gene_synonym="P24"
/gene_synonym="TSPAN29"
/codon_start=1
/product="CD9 molecule"
/protein_id="AAH11988.1"
/db_xref="GeneID:928"
/db_xref="HGNC:HGNC:1709"
/db_xref="MIM:143030"
/translation="MPVKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSI
FEQETNNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAI
EIAAAIWGYSHKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGVE
QFISDICPKKDVLETFTVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSTILC
CAIRRNREMV"
BASE COUNT 302 a 245 c 271 g 368 t
ORIGIN
1 cgcgcccccc agtcccgcac ccgttcggcc caggctaagt tagccctcac catgccggtc
61 aaaggaggca ccaagtgcat caaatacctg ctgttcggat ttaacttcat cttctggctt
121 gccgggattg ctgtccttgc cattggacta tggctccgat tcgactctca gaccaagagc
181 atcttcgagc aagaaactaa taataataat tccagcttct acacaggagt ctatattctg
241 atcggagccg gcgccctcat gatgctggtg ggcttcctgg gctgctgcgg ggctgtgcag
301 gagtcccagt gcatgctggg actgttcttc ggcttcctct tggtgatatt cgccattgaa
361 atagctgcgg ccatctgggg atattcccac aaggatgagg tgattaagga agtccaggag
421 ttttacaagg acacctacaa caagctgaaa accaaggatg agccccagcg ggaaacgctg
481 aaagccatcc actatgcgtt gaactgctgt ggtttggctg ggggcgtgga acagtttatc
541 tcagacatct gccccaagaa ggacgtactc gaaaccttca ccgtgaagtc ctgtcctgat
601 gccatcaaag aggtcttcga caataaattc cacatcatcg gcgcagtggg catcggcatt
661 gccgtggtca tgatatttgg catgatcttc agtacgatct tgtgctgtgc tatccgcagg
721 aaccgcgaga tggtctagag tcagcttaca tccctgagca ggaaagttta cccatgaaga
781 ttggtgggat tttttgtttg tttgttttgt tttgtttgtt gtttgttgtt tgtttttttg
841 ccactaattt tagtattcat tctgcattgc tagataaaag ctgaagttac tttatgtttg
901 tcttttaatg cttcattcaa tattgacatt tgtagttgag cggggggttt ggtttgcttt
961 ggtttatatt ttttcagttg tttgtttttg cttgttatat taagcagaaa tcctgcaatg
1021 aaaggtacta tatttgctag actctagaca agatattgta cataaaagaa tttttttgtc
1081 tttaaataga tacaaatgtc tatcaacttt aatcaagttg taacttatat tgaagacaat
1141 ttgatacata ataaaaaatt atgacaatgt caaaaaaaaa aaaaaa
//