LOCUS BC011922 2370 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens septin 6, mRNA (cDNA clone MGC:20339 IMAGE:4542179),
complete cds.
ACCESSION BC011922
VERSION BC011922.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2370)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2370)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC011922.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2370
/db_xref="H-InvDB:HIT000035542"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20339 IMAGE:4542179"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2370
/gene="SEPT6"
/gene_synonym="KIAA0128"
/gene_synonym="MGC16619"
/gene_synonym="MGC20339"
/gene_synonym="RP5-876A24.2"
/gene_synonym="SEP2"
/db_xref="GeneID:23157"
/db_xref="HGNC:HGNC:15848"
CDS 54..1343
/gene="SEPT6"
/gene_synonym="KIAA0128"
/gene_synonym="MGC16619"
/gene_synonym="MGC20339"
/gene_synonym="RP5-876A24.2"
/gene_synonym="SEP2"
/codon_start=1
/product="septin 6"
/protein_id="AAH11922.3"
/db_xref="GeneID:23157"
/db_xref="HGNC:HGNC:15848"
/translation="MAATDIARQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFN
ILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVST
VGFGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGH
SLKSLDLVTMKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQFPTD
DESVAEINGTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLRE
MLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGE
LQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDE
VNAFKQRKTAAELLQSQGSQAGGSQTLKRDKEKKNFF"
BASE COUNT 684 a 556 c 578 g 552 t
ORIGIN
1 cagtagctcc cgttgcggcg gcacccgtgg cagccctggc ggacgcagga gcgatggcag
61 cgaccgatat agctcgccag gtgggtgaag gttgccgaac tgtccccctg gctggacatg
121 tggggtttga cagcttgcct gaccagctgg tgaataagtc cgtcagccag ggcttctgct
181 tcaacatcct gtgcgtggga gagacaggtt tgggcaagtc caccctcatg gacaccctgt
241 tcaacaccaa attcgaaggg gagccagcca cccacacaca gccgggtgtc cagctccagt
301 ctaataccta tgacctccaa gagagcaacg tgaggctaaa gctcacgatc gttagcacag
361 ttggctttgg ggaccagatc aacaaagagg acagctacaa gcctatcgtg gaattcatcg
421 atgcacaatt cgaggcctac ctgcaggaag agctaaagat ccgaagagtg ctacacacct
481 accatgactc ccgaatccat gtctgcttgt atttcattgc ccccacgggt cattccctga
541 agtctctgga cctagtgact atgaagaagc tggacagtaa ggtgaacatc atccccatca
601 ttgccaaagc agatgccatt tcgaagagtg agctaacaaa gttcaaaatc aaaatcacca
661 gcgagcttgt cagcaacgga gtccagatct atcagtttcc tacagatgat gagtcggtgg
721 cagagatcaa tggaaccatg aacgcccacc tgccgtttgc tgtcattggc agcacagaag
781 aactgaagat aggcaacaag atgatgaggg cgcggcagta tccttggggc actgtgcagg
841 ttgaaaacga ggcccactgc gactttgtga agctgcggga gatgctgatt cgggtcaaca
901 tggaggatct gcgggagcag acccacaccc ggcactatga gctgtatcgc cgctgtaagc
961 tggaggagat gggcttcaag gacaccgacc ctgacagcaa acccttcagt ttacaggaga
1021 catatgaggc caaaaggaac gagttcctag gggaactcca gaaaaaagaa gaggagatga
1081 gacagatgtt cgtccagcga gtcaaagaga aagaagcgga gctcaaagag gcagagaaag
1141 agctgcacga gaagtttgac cgtctgaaga aactgcacca ggacgagaag aagaaactgg
1201 aggataagaa gaaatccctg gatgatgaag tgaatgcttt caagcaaaga aagacggcgg
1261 ctgagctgct ccagtcccag ggctcccagg ctggaggctc acagactctg aagagagaca
1321 aagagaagaa aaactttttt taatcttgtc ttcagcagct gcactaagtc taaaggagaa
1381 gactgccatt atagaagagt tagggttcca tattgtctca aatcagaaat caaccaattt
1441 cctctcccct caaactgcaa gcacacacac atacaccaca ccactcaaca agtgttcatg
1501 tgtccctgtg tccaggcaag aagctctctt cctgactcac atggtatttt aaatggaagt
1561 gtcttgtcct aactaacaag gcaggaaaag aaccatcaga gctggaaaat ggacgaaatg
1621 taacctcaga gaaacaacta caggaccact cacccaagtg taagtgactg gggcaggaca
1681 cctcagctgt gggtatgaaa gtactgttct gttcacaagg ttttgtttga gttttatgtt
1741 tttcttttaa acatttctct ggttcgatgg gttgactgtc tacagccact gttaaacatt
1801 tctgaatatg caagagaaag tcaagtgaca tttgtatctt cttcagcatt cgcagacctt
1861 ctatagattc cagcaaaggg ggaaaatgta tccactatct aacacttagg tagagaaggg
1921 agggggttta agcttagtga gggcaaaatt actccattcc accttccgag accagttagg
1981 gttttgagag aggtttctgc tcaacctggg atctggaggg agagctttga tgttggtaaa
2041 tctgccttga attcattggt ttaacttgca tcaaaatacc atgtgagtgt gctcattctc
2101 atatatcccc taccaccatc accaccattc tgctgttcag tgtctcttga gagagcctct
2161 ttgcatgttt tccagaatct gtgtgtgttt ttcctttctt ctcctttgtt ctttttgctc
2221 aaaggtgtga ccagtcattg cccctctggg gctttcattc tccaggagaa acatcccaga
2281 accagcactg tttagcctga tacctttcta atgtccatgt caattttcaa taaaattcaa
2341 agaaatgcta aaaaaaaaaa aaaaaaaaaa
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