LOCUS BC011902 1506 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens FGFR1 oncogene partner, mRNA (cDNA clone MGC:20288
IMAGE:4120239), complete cds.
ACCESSION BC011902
VERSION BC011902.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1506)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1506)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC011902.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 36287109.
FEATURES Location/Qualifiers
source 1..1506
/db_xref="H-InvDB:HIT000035528"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20288 IMAGE:4120239"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1506
/gene="FGFR1OP"
/gene_synonym="FOP"
/db_xref="GeneID:11116"
/db_xref="HGNC:HGNC:17012"
/db_xref="MIM:605392"
CDS 10..1149
/gene="FGFR1OP"
/gene_synonym="FOP"
/codon_start=1
/product="FGFR1 oncogene partner"
/protein_id="AAH11902.1"
/db_xref="GeneID:11116"
/db_xref="HGNC:HGNC:17012"
/db_xref="MIM:605392"
/translation="MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLA
LEEQEKVENKTPLVNESLRKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQ
GLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPTTGEGALDLSDVHSPPKS
PEGKTSAQTTPSKKANDEANQSDTSVSLSEPKSKSSLHLLSHETKIGSFLSNRTLDGK
DKAGLCPDEDDMEGDSFFDDPIPKPEKTYGLRNEPRKQAGSLASLSDAPPLKSGLSSL
AGAPSLKDSESKRGNTVLKDLKLISDKIGSLGLGTGEDDDYVDDFNSTSHRSEKSEIS
IGEEIEEDLSVEIDDINTSDKLDDLTQDLTVSQLSDVADYLEDVA"
BASE COUNT 491 a 279 c 353 g 383 t
ORIGIN
1 gagagagaga tggcggcgac ggcggccgca gtggtggccg aggaggacac ggagctgcgg
61 gacctgctgg tgcagacgct ggagaacagc ggggtcctga accgcatcaa ggctgaactc
121 cgagcagctg tgtttttagc actagaggag caagaaaaag tagagaacaa aactccttta
181 gttaatgaga gcctgagaaa gtttttaaat accaaagacg gtcgtttagt ggctagtctt
241 gttgcagaat ttcttcagtt ttttaacctt gactttactt tggctgtttt tcaacctgaa
301 actagcacac tgcaaggtct cgaaggtcga gagaatttag cccgagattt aggtataatt
361 gaagcagaag gtactgtggg tggaccctta ttattagaag tgatcaggcg ctgtcaacag
421 aaagaaaaag ggccaaccac tggggaaggt gcacttgatc tatctgatgt acattctcca
481 ccaaagtcac cagagggaaa aacaagtgca cagacaacac caagtaagaa ggccaatgat
541 gaggccaatc agagtgatac aagtgtctcc ttgtcagaac ccaagagcaa aagcagcctt
601 cacttactgt cccatgaaac aaaaattgga tcttttctaa gcaacagaac tttagatggc
661 aaagacaaag ctggcctttg tccagatgaa gatgatatgg aaggagattc tttctttgat
721 gatcccattc ctaagccaga gaaaacttac ggtttgagga atgaacctag gaagcaagca
781 ggaagtctgg cctcgctctc ggatgcaccc cccttaaaaa gtggactcag ctccctggcg
841 ggagcccctt ctttaaaaga ctctgagagt aaaaggggaa atacagtttt gaaagatctg
901 aaattgatca gtgataaaat tggatcactt ggattaggaa ctggagaaga tgatgactat
961 gttgatgatt ttaatagtac cagccatcgc tcagagaaaa gtgagataag tattggtgaa
1021 gagatagaag aagacctttc tgtggaaata gatgacatca ataccagtga taagcttgat
1081 gacctcacac aagatctgac tgtatcccag ctcagtgatg ttgcggatta tctggaagat
1141 gttgcataga cacgaagaag gaagtattct aattaacaag gacagaggac tgaccggttc
1201 catttttttt ttttccagac aatcactcag ctggaatgtc tgctctctat tggtgccttg
1261 catttcaaaa acactgcaga tattttttaa aagtaatttt cattttacta aacaaaatac
1321 ttcctatttg agcccatgtg tggaagattt aatattctta atttagctgt acatttcttt
1381 atggaaattg attatctaca ttcagtttca ttacagggaa ggaacccatg aaaacatcag
1441 tgttaagagc atgatgaaag gtgtcaataa agccgtagga tcacgcaaaa aaaaaaaaaa
1501 aaaaaa
//