LOCUS BC011894 1390 bp mRNA linear HUM 17-AUG-2004
DEFINITION Homo sapiens haloacid dehalogenase-like hydrolase domain containing
2, mRNA (cDNA clone MGC:20277 IMAGE:3944181), complete cds.
ACCESSION BC011894
VERSION BC011894.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1390)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1390)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011894.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: g Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149776.
FEATURES Location/Qualifiers
source 1..1390
/db_xref="H-InvDB:HIT000050558"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20277 IMAGE:3944181"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1390
/gene="HDHD2"
/gene_synonym="3110052N05Rik"
/gene_synonym="DKFZP564D1378"
/db_xref="GeneID:84064"
CDS 425..934
/gene="HDHD2"
/gene_synonym="3110052N05Rik"
/gene_synonym="DKFZP564D1378"
/codon_start=1
/product="HDHD2 protein"
/protein_id="AAH11894.1"
/db_xref="GeneID:84064"
/translation="MLLVDDRALPDFKGIQTSDPNAVVMGLAPEHFHYQILNQAFRLL
LDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKATVVGKPEKTFFLEALRGT
GCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTGKYRASDEEKINPPPYLTCESFPHA
VDHILQHLL"
BASE COUNT 404 a 263 c 362 g 361 t
ORIGIN
1 cgggcagcag cggggctgtc tatcccggct gaggacccgc ggccagtgcg ggtggctggc
61 tttgccatta gcgggggcct ttcctgagga cggcgtacgg agtgtgggga atgaaggatg
121 gcagcatgcc gtgcattaaa agctgttttg gtagatctca gtggcacact tcacattgaa
181 gatgcagctg tgccaggcgc acaggaagct cttaaaaggc aagctatcct ccaggttcag
241 ctgacaaata tgtttgttac gtggtgcttc tgtaatcatt aggtttgtga ccaatacaac
301 caaagagagc aagcaagacc tgttagaaag gttgagaaaa ttggaatttg atatctctga
361 agatgaaata ttcacatctc tgactgcagc cagaagttta ctagagcgga aacaagtcag
421 acccatgctg ctagttgatg atcgggcact acctgatttc aaaggaatac aaacaagtga
481 tcctaatgct gtggtcatgg gattggcacc agaacatttt cattatcaaa ttctgaatca
541 agcattccgg ttactcctgg atggagcacc tctgatagca atccacaaag ccaggtatta
601 caagaggaaa gatggcttag ccctggggcc tggaccattt gtgactgctt tagagtatgc
661 cacagatacc aaagccacag tcgtggggaa accagagaag acgttctttt tggaagcatt
721 gcggggcact ggctgtgaac ctgaggaggc tgtcatgata ggagatgatt gcagggatga
781 tgttggtggg gctcaagatg tcggcatgct gggcatctta gtaaagactg ggaaatatcg
841 agcatcagat gaagaaaaaa ttaatccacc tccttactta acttgtgaga gtttccctca
901 tgctgtggac cacattctgc agcacctatt gtgaagcaat gtgtgcatct gaagcaactt
961 gaaatgcagc ttcttattgt ctggaatgaa tcccttacca actcagtgcc agcatcggta
1021 gacaccagtc agtgctgatc gctttttaac cctcttttgt tgtgcattaa ttagaaagaa
1081 aggtattgaa ttgcggctag ccagtaagcc ttgctaatct cttttatttt gtaactgaag
1141 atgagaccca aagaaaggga aagctgagat tttgtgccat tccttttaaa atattcatca
1201 ggttaggtgg ggctgtgggg gaaaagctac tacagggaag agtgttctct gctgtctctt
1261 cactggaaaa cagggagggg ggatttcaga ctgtgaagaa agttgaatgg tggtttttaa
1321 attataaagt aatgtattaa aaggtgcatt aggctgtagt tctaaaaaaa aaaaaaaaaa
1381 aaaaaaaaaa
//