LOCUS BC011876 3499 bp mRNA linear HUM 06-APR-2004
DEFINITION Homo sapiens ADP-ribosylation factor GTPase activating protein 1,
mRNA (cDNA clone MGC:19964 IMAGE:3162991), complete cds.
ACCESSION BC011876
VERSION BC011876.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3499)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3499)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: a Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28416434.
FEATURES Location/Qualifiers
source 1..3499
/db_xref="H-InvDB:HIT000258947"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19964 IMAGE:3162991"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3499
/gene="ARFGAP1"
/gene_synonym="ARF1GAP"
/gene_synonym="HRIHFB2281"
/gene_synonym="MGC39924"
/db_xref="GeneID:55738"
/db_xref="MIM:608377"
CDS 101..1312
/gene="ARFGAP1"
/gene_synonym="ARF1GAP"
/gene_synonym="HRIHFB2281"
/gene_synonym="MGC39924"
/codon_start=1
/product="ARFGAP1 protein"
/protein_id="AAH11876.1"
/db_xref="GeneID:55738"
/db_xref="MIM:608377"
/translation="MASPRTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLE
CSGRHRGLGVHLSFVRSVTMDKWKDIELEKMKAGGNAKFREFLESQEDYDPCWSLQEK
YNSRAAALFRDKVVALAEGREWSLESSPAQNWTPPQPRTLPSMVHRVSGQPQSVTASS
DKAFEDWLNDDLGSYQGAQGNRYVGFGNTPPPQKKEDDFLNNAMSSLYSGWSSFTTGA
SRFASAAKEGATKFGSQASQKASELGHSLNENVLKPAQEKVKEGKIFDDVSSGVSQLA
SKCQRRLCCHQSHCSAGHLGRAFCPVSWHEALCGQTGREEQASLLPPKHVVGALEVCA
RGCPRCHVPHTPGTAAEWPGRLCLSRESVVRDGGTSPPFFRGKQRAPWTAPRRATVIR
TAVWTTSKTAT"
misc_feature 119..472
/gene="ARFGAP1"
/gene_synonym="ARF1GAP"
/gene_synonym="HRIHFB2281"
/gene_synonym="MGC39924"
/note="ArfGap; Region: Putative GTPase activating protein
for Arf. Putative zinc fingers with GTPase activating
proteins (GAPs) towards the small GTPase, Arf. The GAP of
ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs"
/db_xref="CDD:pfam01412"
BASE COUNT 653 a 1043 c 1127 g 676 t
ORIGIN
1 ggcacgaggg gcgaccgggc gcatcctcat tgcagtgcgg cggccctacc tcggccctgg
61 cctgaccccg gcggccctgc ccgcccctcc ctccagcatc atggccagcc caagaaccag
121 gaaggttctt aaagaagtca gggtgcagga tgagaacaac gtttgttttg agtgtggcgc
181 gttcaatcct cagtgggtca gtgtgaccta cggcatctgg atctgcctgg agtgctcggg
241 gagacaccgc gggcttgggg ttcacctcag ctttgtgcgc tctgttacta tggacaagtg
301 gaaggacatt gagcttgaga agatgaaagc tggtgggaat gctaagttcc gagagttcct
361 ggagtctcag gaggattacg atccttgctg gtccttgcag gagaagtaca acagcagagc
421 cgcggccctc tttagggata aggtggtcgc tctggccgaa ggcagagagt ggtctctgga
481 gtcatcacct gcccagaact ggaccccacc tcagcccagg acgctgccgt ccatggtgca
541 ccgagtctct ggccagccgc agagtgtgac cgcctcctcg gacaaggctt ttgaagactg
601 gctgaatgat gacctcggct cctatcaagg ggcccagggg aatcgctacg tggggtttgg
661 gaacacgcca ccgcctcaga agaaagaaga tgacttcctc aacaacgcca tgtcctccct
721 gtactcgggc tggagcagct tcaccactgg agccagccgg tttgcctcgg cagccaagga
781 gggcgctaca aagtttggat cccaagcgag tcagaaggcg tccgagctgg gccacagcct
841 gaacgagaac gtcctcaagc ctgcgcagga gaaggtgaag gagggaaaga tttttgatga
901 tgtctccagt ggggtctctc agttggcgtc caagtgccag cgccgtcttt gctgccatca
961 gtcccactgc tctgcgggcc atttggggcg tgcattttgt cctgtttcct ggcatgaggc
1021 gctctgcgga cagacgggga gggaagagca ggcctcgctc ctccccccca agcatgtggt
1081 gggagctctt gaggtctgtg cacgaggctg tcctcgctgc catgtcccgc acacacctgg
1141 caccgctgca gagtggccgg ggcgtctgtg tctgtccagg gagtcggtag taagggatgg
1201 cgggacgtca ccaccttttt ttcggggaaa gcagagggcc ccttggacag cccctcggag
1261 ggccacagtt atcagaacag cggtctggac cacttccaaa acagcaacat agaccagagc
1321 ttctgggaga cctttggaag tgctgagccc accaagaccc gcaagtcccc gagcagcgac
1381 agctggacgt gcgcggacac ctccaccgag aggaggagct cggacagctg ggaggtgtgg
1441 ggctcggcct ccaccaacag gaacagcaac agcgacggcg gggagggcgg ggagggcacc
1501 aagaaggcag tgccgccggc cgtgcccact gatgatggct gggacaacca gaactggtag
1561 ggcccactgc gcccccgtcc ccagcgcccc cgggcgactt cgtgtttgca ctctgccctc
1621 gtcgttcctc ctccttccat ttgacccaag aatcagcaac tgcagtgtga ggacagcgtc
1681 tcgggaggca ggaccctagg gagacccggg tgtgcgccgc ctgcgcgtgg ggagtcttcg
1741 gtgcgtgggg gcggcttgct gtccagcctg tgtgggggcc gtcccgtccc acactcccct
1801 gggcattctt ggactcaagg ccggggctct gcgtggcttg ctgggaggtg ggctgcagca
1861 cagaggcctg tgactgcgtt ccagcggcca gttcactacg cagtatctct ggggcctggg
1921 accagccacg tgccgagctg tcagcgacgt gaggtgtccc ttctcgttga gatatttaac
1981 tttggttttg ctctagttct ttctttttga agagagtgac tggagtggta aagatggaaa
2041 tgctggaaat gatactggcg ctcacgctgc catccgacca ccctcggctc ccgagtccac
2101 gcctgcctgg gcctgtgctg tcagacccgc gtcggtcgta accctctgtg gctcccctgc
2161 atcagcaccg tcccaccacc aagttcacca ggttcaccag acacggcctc cacaatagcc
2221 acacccacac ctgagctgtt ctcagtgctg gaacttgacc atcctggaac accctggaag
2281 aaaaaggagc gcagggtggg ccctcggccc tgatgcagga gggtgcgata gcggacgtgg
2341 ccaggcagga ggggccgggt tcaggagctg agcaggggat gcctgtgcgt ggtgcctggg
2401 tctagggaag ctccagcccc aggatggggc tgccctgcac accggtgccc gccacatgcc
2461 aaccctcacc tccccgagga ctggatgatg tgctgccacg tgtgactcgt ctcccttgtc
2521 tgccctgtgt gaccctcagt cttggccagc catgcatgcg cccgaagctc gtgcagtttg
2581 tacgtgaggt gctctcctcc ctgccaccat gctcatcact ctggccttgg ccatgctccc
2641 tggtcacccc acttcccggt cgccgtctgc agcactcctg gagcagcctg ggcccttcag
2701 cccctgtgct cgtcccaccc tagggactca gccacttgca gaacaggatg ggaccgagat
2761 ttcagcgagc cctcctggcg cccggtcctc cctgtgggca ccagccctct tggtagctgg
2821 tgtggagggc cggtgtcctt ggctgccacg gagggatttg atcaccgaag cagccacctg
2881 ctgtagttgg acctgaggtc agaggcgggg catcagaggc tcaaggtgct gagaagccac
2941 cgggaaagca gccagcacaa agggcccagg aagccagccc ccgagagctg agcgtggggg
3001 tctttgagtg tctttctcca agctgagacg tgggcggccg cgtggtatct cccgagggct
3061 gcttggaccc tggtgggctg agtgctccga ggaggggtgg actccacctt ggacagtggg
3121 atgtggtgtt ccacatgtgc ctgtttccac gccagcacct tgacttggca gcatggagcc
3181 aaggtctgtc cccgcccagg agggtgcctt cctcgggggt agggggacgg cccactctgc
3241 cccagggagt cccttttgat gggaagtgca gtcagcagcg tggaggtgtc tgggccacct
3301 tcagaaggtg gatgtggtgg ccgagacccc gtccacggag ggtgatggcc tttcccttct
3361 gcaggtgcgg gcaggtgggc ctgggaccgg tgctggggcc tctccttgct gtgtgtgagg
3421 gcccaggtgg aaggcgcgga cctgacagca ttccaataaa gcatacggga acatgaaaaa
3481 aaaaaaaaaa aaaaaaaaa
//