LOCUS BC011798 2364 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aminolevulinate, delta-, synthase 1, mRNA (cDNA clone
MGC:19565 IMAGE:4138141), complete cds.
ACCESSION BC011798
VERSION BC011798.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2364)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2364)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011798.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40316942.
FEATURES Location/Qualifiers
source 1..2364
/db_xref="H-InvDB:HIT000035460"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19565 IMAGE:4138141"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2364
/gene="ALAS1"
/gene_synonym="ALASH"
/gene_synonym="MIG4"
/db_xref="GeneID:211"
/db_xref="HGNC:HGNC:396"
/db_xref="MIM:125290"
CDS 281..2203
/gene="ALAS1"
/gene_synonym="ALASH"
/gene_synonym="MIG4"
/codon_start=1
/product="aminolevulinate, delta-, synthase 1"
/protein_id="AAH11798.1"
/db_xref="GeneID:211"
/db_xref="HGNC:HGNC:396"
/db_xref="MIM:125290"
/translation="MESVVRRCPFLSRVPQAFLQKAGKSLLFYAQNCPKMMEVGAKPA
PRALSTAAVHYQQIKETPPASEKDKTAKAKVQQTPDGSQQSPDGTQLPSGHPLPATSQ
GTASKCPFLAAQMNQRGSSVFCKASLELQEDVQEMNAVRKEVAETSAGPSVVSVKTDG
GDPSGLLKNFQDIMQKQRPERVSHLLQDNLPKSVSTFQYDRFFEKKIDEKKNDHTYRV
FKTVNRRAHIFPMADDYSDSLITKKQVSVWCSNDYLGMSRHPRVCGAVMDTLKQHGAG
AGGTRNISGTSKFHVDLERELADLHGKDAALLFSSCFVANDSTLFTLAKMMPGCEIYS
DSGNHASMIQGIRNSRVPKYIFRHNDVSHLRELLQRSDPSVPKIVAFETVHSMDGAVC
PLEELCDVAHEFGAITFVDEVHAVGLYGARGGGIGDRDGVMPKMDIISGTLGKAFGCV
GGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGALESVRILKSAEGRVLRRQHQRNV
KLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDELMSRHNIYVQAINYPTVPRG
EELLRIAPTPHHTPQMMNYFLENLLVTWKQVGLELKPHSSAECNFCRRPLHFEVMSER
EKSYFSGLSKLVSAQA"
BASE COUNT 619 a 607 c 590 g 548 t
ORIGIN
1 agcgtttcgt ttggacttct cgacttgagt gcccgcctcc ttcgccgccg cctctgcagt
61 cctcagcgca gttatgccca gttcttcccg ctgtggggac acgaccacgg aggaatcctt
121 gcttcaggga ctcgggaccc tgctggaccc cttcctcggg tttaggggat gtggggacca
181 ggagaaagtc aggatcccta agagtcttcc ctgcctggat ggatgagtgg cttcttctcc
241 acctagattc tttccacagg agccagcata cttcctgaac atggagagtg ttgttcgccg
301 ctgcccattc ttatcccgag tcccccaggc ctttctgcag aaagcaggca aatctctgtt
361 gttctatgcc caaaactgcc ccaagatgat ggaagttggg gccaagccag cccctcgggc
421 attgtccact gcagcagtac actaccaaca gatcaaagaa acccctccgg ccagtgagaa
481 agacaaaact gctaaggcca aggtccaaca gactcctgat ggatcccagc agagtccaga
541 tggcacacag cttccgtctg gacacccctt gcctgccaca agccagggca ctgcaagcaa
601 atgccctttc ctggcagcac agatgaatca gagaggcagc agtgtcttct gcaaagccag
661 tcttgagctt caggaggatg tgcaggaaat gaatgccgtg aggaaagagg ttgctgaaac
721 ctcagcaggc cccagtgtgg ttagtgtgaa aaccgatgga ggggatccca gtggactgct
781 gaagaacttc caggacatta tgcaaaagca aagaccagaa agagtgtctc atcttcttca
841 agataacttg ccaaaatctg tttccacttt tcagtatgat cgtttctttg agaaaaaaat
901 tgatgagaaa aagaatgacc acacctatcg agtttttaaa actgtgaacc ggcgagcaca
961 catcttcccc atggcagatg actattcaga ctccctcatc accaaaaagc aagtgtcagt
1021 ctggtgcagt aatgactacc taggaatgag tcgccaccca cgggtgtgtg gggcagttat
1081 ggacactttg aaacaacatg gtgctggggc aggtggtact agaaatattt ctggaactag
1141 taaattccat gtggacttag agcgggagct ggcagacctc catgggaaag atgccgcact
1201 cttgttttcc tcgtgctttg tggccaatga ctcaaccctc ttcaccctgg ctaagatgat
1261 gccaggctgt gagatttact ctgattctgg gaaccatgcc tccatgatcc aagggattcg
1321 aaacagccga gtgccaaagt acatcttccg ccacaatgat gtcagccacc tcagagaact
1381 gctgcaaaga tctgacccct cagtccccaa gattgtggca tttgaaactg tccattcaat
1441 ggatggggcg gtgtgcccac tggaagagct gtgtgatgtg gcccatgagt ttggagcaat
1501 caccttcgtg gatgaggtcc acgcagtggg gctttatggg gctcgaggcg gagggattgg
1561 ggatcgggat ggagtcatgc caaaaatgga catcatttct ggaacacttg gcaaagcctt
1621 tggttgtgtt ggagggtaca tcgccagcac gagttctctg attgacaccg tacggtccta
1681 tgctgctggc ttcatcttca ccacctctct gccacccatg ctgctggctg gagccctgga
1741 gtctgtgcgg atcctgaaga gcgctgaggg acgggtgctt cgccgccagc accagcgcaa
1801 cgtcaaactc atgagacaga tgctaatgga tgccggcctc cctgttgtcc actgccccag
1861 ccacatcatc cctgtgcggg ttgcagatgc tgctaaaaac acagaagtct gtgatgaact
1921 aatgagcaga cataacatct acgtgcaagc aatcaattac cctacggtgc cccggggaga
1981 agagctccta cggattgccc ccacccctca ccacacaccc cagatgatga actacttcct
2041 tgagaatctg ctagtcacat ggaagcaagt ggggctggaa ctgaagcctc attcctcagc
2101 tgagtgcaac ttctgcagga ggccactgca ttttgaagtg atgagtgaaa gagagaagtc
2161 ctatttctca ggcttgagca agttggtatc tgctcaggcc tgagcatgac ctcaattatt
2221 tcacttaacc ccaggccatt atcatatcca gatggtcttc agagttgtct ttatatgtga
2281 attaagttat attaaatttt aatctatagt aaaaacatag tcctggaaat aaaaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaa
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