LOCUS BC011684 3504 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens GATA zinc finger domain containing 2A, mRNA (cDNA
clone MGC:19816 IMAGE:3953055), complete cds.
ACCESSION BC011684
VERSION BC011684.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3504)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3504)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: k Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923501.
FEATURES Location/Qualifiers
source 1..3504
/db_xref="H-InvDB:HIT000035373"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19816 IMAGE:3953055"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3504
/gene="GATAD2A"
/gene_synonym="FLJ20085"
/gene_synonym="p66alpha"
/db_xref="GeneID:54815"
/db_xref="HGNC:HGNC:29989"
CDS 471..1943
/gene="GATAD2A"
/gene_synonym="FLJ20085"
/gene_synonym="p66alpha"
/codon_start=1
/product="GATA zinc finger domain containing 2A"
/protein_id="AAH11684.1"
/db_xref="GeneID:54815"
/db_xref="HGNC:HGNC:29989"
/translation="MIKQLKEELRLEEAKLVLLKKLRQSQIQKEATAQKPTGSVGSTV
TTPPPLVRGTQNIPAGKPSLQTSSARMPGSVIPPPLVRGGQQASSKLGPQASSQVVMP
PLVRGAQQIHSIRQHSSTGPPPLLLAPRASVPSVQIQGQRIIQQGLIRVANVPNTSLL
VNIPQPTPASLKGTTATSAQANSTPTSVASVVTSAESPASRQAAAKLALRKQLEKTLL
EIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLETQGRMSAATVLSREPYMCAQ
CKTDFTCRWREEKSGAIMCENCMTTNQKKALKVEHTSRLKAAFVKALQQEQEIEQRLL
QQGTAPAQAKAEPTAAPHPVLKQVIKPRRKLAFRSGEARDWSNGAVLQASSQLSRGSA
TTPRGVLHTFSPSPKLQNSASATALVSRTGRHSERTVSAGKGSATSNWKKTPLSTGGT
LAFVSPSLAVHKSSSAVDRQREYLLDMIPPRSIPQSATWK"
BASE COUNT 808 a 1044 c 978 g 674 t
ORIGIN
1 gcacgagggg agattgttgc cagggctctg gtgagttcag aatgaccgaa gaagcatgcc
61 gaacacggag tcagaaacga gcgcttgaac gggacccaac agaggacgat gtggagagca
121 agaaaataaa aatggagaga ggattgttgg cttcagattt aaacactgac ggagacatga
181 gggtgacacc tgagccggga gcaggtccaa cccaaggatt gctgagggca acagaggcca
241 cggccatggc catgggcaga ggcgaagggc tggtgggcga tgggcccgtg gacatgcgca
301 cctcacacag tgacatgaag tccgagagga gacccccctc acctgacgtg attgtgctct
361 ccgacaacga gcagccctcg agcccgagag tgaatgggct gaccacggtg gccttgaagg
421 agactagcac cgaggccctc atgaaaagca gtcctgaaga acgagaaagg atgatcaagc
481 agctgaagga agaattgagg ttagaagaag caaaactcgt gttgttgaaa aagttgcggc
541 agagtcaaat acaaaaggaa gccaccgccc agaagcccac aggttctgtt gggagcaccg
601 tgaccacccc tcccccgctt gttcggggca ctcagaacat tcctgctggc aagccatcac
661 tccagacctc ttcagctcgg atgcccggca gtgtcatacc cccgcccctg gtccgaggtg
721 ggcagcaggc gtcctcgaag ctggggccac aggcgagctc acaggtcgtc atgcccccac
781 tcgtcagggg ggctcagcaa atccacagca ttaggcaaca ttccagcaca gggccaccgc
841 ccctcctcct ggccccccgg gcgtcggtgc ccagtgtgca gattcaggga cagaggatca
901 tccagcaggg cctcatccgc gtcgccaatg ttcccaacac cagcctgctc gtcaacatcc
961 cacagcccac cccagcatca ctgaagggga caacagccac ctccgctcag gccaactcca
1021 cccccactag tgtggcctct gtggtcacct ctgccgagtc tccagcaagc cgacaggcgg
1081 ccgccaagct ggcgctgcgc aaacagctgg agaagacgct actcgagatc cccccaccca
1141 agcccccagc cccagagatg aacttcctgc ccagcgccgc caacaacgag ttcatctacc
1201 tggtcggcct ggaggaggtg gtgcagaacc tactggagac acaaggcagg atgtcggccg
1261 ccactgtgct gtcccgggag ccctacatgt gtgcacagtg caagacggac ttcacgtgcc
1321 gctggcggga ggagaagagc ggcgccatca tgtgtgagaa ctgcatgaca accaaccaga
1381 agaaggcgct caaggtggag cacaccagcc ggctgaaggc cgcctttgtg aaggcgctgc
1441 agcaggaaca ggagattgag cagcggctcc tgcagcaggg cacggcccct gcacaggcca
1501 aggccgagcc caccgctgcc ccacaccccg tgctgaagca ggtcataaaa ccccggcgta
1561 agttggcgtt ccgctcagga gaggcccgcg actggagtaa cggggctgtg ctacaggcct
1621 ccagccagct gtcccggggt tcggccacga cgccccgagg tgtcctgcac acgttcagtc
1681 cgtcacccaa actgcagaac tcagcctcgg ccacagccct ggtcagcagg accggcagac
1741 attctgagag aaccgtgagc gccggcaagg gcagcgccac ctccaactgg aagaagacgc
1801 ccctcagcac aggcgggacc cttgcgtttg tcagcccaag cctggcggtg cacaagagct
1861 cctcggccgt ggaccgccag cgagagtacc tcctggacat gatcccaccc cgctccatcc
1921 cccagtcagc cacgtggaaa tagtgcgagc caggccccgt ggaagacggg ctccctcctc
1981 ccccacctgg cccctggtct agaaggaccc actgcaccac cctccgctgg ctcgggaaga
2041 caccgtgccc gccccaagag caagcaccgg ccatgctgca gaggcaagac ctcaattctt
2101 ggctgcaaag tttcatcagg gctagggggc tggtgccgcc tcataggcag acgaggatca
2161 tcgctggggg acctttcccg tgggctttct tcctttctct ctttgccttt agtttgcccg
2221 acaccagcag aaaagtggac cttgggggct ggttctgctc ctggccccct tgttcagccc
2281 ctgccggcac acgggcggct caccctggac actgtgatgc gcatgggcaa ggccagcgcc
2341 cggggcttct gaaccgagcg gggtgtttca tttttttgct tttccctgtc ttaggctccc
2401 agtctttgac tgccttccca tggcgatcta taagttgaaa gatttttttt tttttaatca
2461 cctcatgatg atggagttaa aagtaaaccg tgcagaccct ggggtccctg ttgtacgctg
2521 catcatcccg ctggccctgt gccctggagg gtgggcggct catggtgcca cagcccctgg
2581 cagggacggc cggcccgccc ccgtgactga ctgacagatg cagggatggc cgaggcagcc
2641 ctcgctccag ctgaacgcct ccattgctgc ttgttctgga gacccccgcc cccgcacctt
2701 ccagacttag cagaagaaca aactgaagaa cagacccagc cagagaagca gggattccag
2761 aagctgccca ttaagggaga aggagaggat ccggtcggca gcagccctga gcagaaagct
2821 ggagggggga ctgtcgcggg gtttttctgt tgtggtttat tttattaaat tttttccttt
2881 tttctattca tttcgatgga cgcaatctta agccaccctg gccttgctcc tgggaggtga
2941 gcgtgcacag gtgtgtgcag gtcaggaggt gccgtccagg tgtgcggcga gccgctgcgc
3001 acagatgtca ggatttccgt ttgggtctag tttagaacct gtccttaaac ctaggggttg
3061 ctgtcaggat ttgctttcag actttttttt tttgtaattc cctttagagt ctacaaaaat
3121 gtttttaaaa ggatcaggtc tgcttttagt ttcatttttg tttctttccc gtcccactct
3181 ttaaaaactg gttccgtgag gaaaggcaga agccgttccg tgtctcttgc aggctgggcc
3241 ggcttcatgc cagtgcgagg gcgtcccgtg cccacgtaca tacgtatgtc tccatgagtt
3301 ctgggctcca ctggttccaa ttgagctcca gccctggttt tcctacccat gcagttaggg
3361 actttaattt aatttttttt ttgtagggcc accgccttca aacacaactg ctacaacatt
3421 ctaataaagg ctcatttaac ccccagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaaa
//