LOCUS BC011668 1499 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens casein kinase 2, alpha 1 polypeptide, mRNA (cDNA clone
MGC:15232 IMAGE:4121882), complete cds.
ACCESSION BC011668
VERSION BC011668.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1499)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1499)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC011668.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47419902.
FEATURES Location/Qualifiers
source 1..1499
/db_xref="H-InvDB:HIT000035357"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15232 IMAGE:4121882"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1499
/gene="CSNK2A1"
/gene_synonym="CK2A1"
/gene_synonym="CKII"
/gene_synonym="CKII alpha"
/db_xref="GeneID:1457"
/db_xref="HGNC:HGNC:2457"
/db_xref="MIM:115440"
CDS 149..1324
/gene="CSNK2A1"
/gene_synonym="CK2A1"
/gene_synonym="CKII"
/gene_synonym="CKII alpha"
/codon_start=1
/product="casein kinase 2, alpha 1 polypeptide"
/protein_id="AAH11668.1"
/db_xref="GeneID:1457"
/db_xref="HGNC:HGNC:2457"
/db_xref="MIM:115440"
/translation="MSGPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRK
LGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVK
DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH
NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL
GCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH
SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM
GSSSMPGGSTPVSSANMMSGISSVPTPSPLGPLAGSPVIAAANPLGMPVPAAAGAQQ"
BASE COUNT 437 a 338 c 360 g 364 t
ORIGIN
1 aggggagagc ggccgccgcc gctgccgctt ccaccacagt ttgaagaaaa caggtctgaa
61 acaaggtctt acccccagct gcttctgaac acagtgactg ccagatctcc aaacatcaag
121 tccagctttg tccgccaacc tgtctgacat gtcgggaccc gtgccaagca gggccagagt
181 ttacacagat gttaatacac acagacctcg agaatactgg gattacgagt cacatgtggt
241 ggaatgggga aatcaagatg actaccagct ggttcgaaaa ttaggccgag gtaaatacag
301 tgaagtattt gaagccatca acatcacaaa taatgaaaaa gttgttgtta aaattctcaa
361 gccagtaaaa aagaagaaaa ttaagcgtga aataaagatt ttggagaatt tgagaggagg
421 tcccaacatc atcacactgg cagacattgt aaaagaccct gtgtcacgaa cccccgcctt
481 ggtttttgaa cacgtaaaca acacagactt caagcaattg taccagacgt taacagacta
541 tgatattcga ttttacatgt atgagattct gaaggccctg gattattgtc acagcatggg
601 aattatgcac agagatgtca agccccataa tgtcatgatt gatcatgagc acagaaagct
661 acgactaata gactggggtt tggctgagtt ttatcatcct ggccaagaat ataatgtccg
721 agttgcttcc cgatacttca aaggtcctga gctacttgta gactatcaga tgtacgatta
781 tagtttggat atgtggagtt tgggttgtat gctggcaagt atgatctttc ggaaggagcc
841 atttttccat ggacatgaca attatgatca gttggtgagg atagccaagg ttctggggac
901 agaagattta tatgactata ttgacaaata caacattgaa ttagatccac gtttcaatga
961 tatcttgggc agacactctc gaaagcgatg ggaacgcttt gtccacagtg aaaatcagca
1021 ccttgtcagc cctgaggcct tggatttcct ggacaaactg ctgcgatatg accaccagtc
1081 acggcttact gcaagagagg caatggagca cccctatttc tacactgttg tgaaggacca
1141 ggctcgaatg ggttcatcta gcatgccagg gggcagtacg cccgtcagca gcgccaatat
1201 gatgtcaggg atttcttcag tgccaacccc ttcacccctt ggacctctgg caggctcacc
1261 agtgattgct gctgccaacc cccttgggat gcctgttcca gctgccgctg gcgctcagca
1321 gtaacggccc tatctgtctc ctgatgcctg agcagaggtg ggggagtcca ccctctcctt
1381 gatgcagctt gcgcctggcg gggaggggtg aaacacttca gaagcaccgt gtctgaaccg
1441 ttgcttgtgg atttatagta gttcagtcat aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//