LOCUS BC011657 2817 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens splicing factor 1, mRNA (cDNA clone IMAGE:4124268),
partial cds.
ACCESSION BC011657
VERSION BC011657.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2817)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2817)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC011657.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: e Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2817
/db_xref="H-InvDB:HIT000087683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4124268"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 607 a 858 c 698 g 654 t
ORIGIN
1 agatggttgc actcaatccg gatttcaagc cacctgcaga ttacaaacct ccagcaacac
61 gtgtgagtga taaagtcatg attccacaag atgagtaccc agaaatcaac tttgtggggc
121 tgctcatcgg gcccagaggg aacaccctga agaacataga gaaggagtgc aatgccaaga
181 ttatgatccg ggggaaaggg tctgtgaaag aagggaaggt tgggcgcaaa gatggccaga
241 tgttgccagg agaagatgag ccacttcatg ccctggttac tgccaataca atggagaacg
301 tcaaaaaggc agtggaacag ataagaaaca tcctgaagca gggtatcgag actccagagg
361 accagaatga tctacggaag atgcagcttc gggagttggc tcgcttaaat gggacccttc
421 gggaagacga taacaggatc ttaagaccct ggcagagctc agagacccgc agcattacca
481 acaccacagt gtgtaccaag tgtggagggg ctggccacat tgcttcagac tgtaaattcc
541 aaaggcctgg tgatcctcag tcagctcagg ataaagcacg gatggataaa gaatatttgt
601 ccctcatggc tgaactgggt gaagcacctg tcccagcatc tgtgggctcc acctctgggc
661 ctgccaccac acccctggcc agcgcacctc gtcctgctgc tcccgccaac aacccacctc
721 caccgtctct catgtctacc acccagagcc gcccaccctg gatgaattct ggcccttcag
781 agagtcggcc ctaccacggc atgcatggag gtggtcctgg tgggcccgga ggtggccccc
841 acagcttccc acacccatta cccagcctga caggtgggca tggtggacat cccatgcagc
901 acaaccccaa tggaccccca cccccttgga tgcagccacc accaccaccg atgaaccagg
961 gcccccaccc tcctgggcac catggccctc ctccaatgga tcagtacctg ggaagtacgc
1021 ctgtgggctc tggggtctat cgcctgcatc aaggaaaagg tatgatgccg ccaccaccta
1081 tgggcatgat gccgccgccg ccgccgcctc ccagtgggca gcccccaccc cctccctctg
1141 gtcctcttcc cccatggcaa caacagcagc agcagcctcc gccaccccct ccgcccagca
1201 gcagtatggc ttccagtacc cccttgccat ggcagcaaaa tacgacgact accaccacga
1261 gcgctggcac agggtccatc ccgccatggc aacagcagca ggcggctgcc gcagcttctc
1321 caggagcccc tcagatgcaa ggcaacccca ctatggtgcc cctgcccccc ggggtccagc
1381 cgcctctgcc gcctggggcc cctccccctc cgccgcctcc accgcctggt tccgccggca
1441 tgatgtatgc cccgccccct cctcctccgc ctcccatgga cccttctaac tttgtcacca
1501 tgatgggcat gggggtggcg ggcatgccgc ccttcgggat gcctccagct cccccaccgc
1561 ctccaccaca gaactagact tgttttttaa gaaaatatat attatatata gagagaattg
1621 gtctcgttta aacacgccga acctcaccat atggagccag acattgggac gcacgcatgt
1681 gattgtgtgt gcacgcatgt gtgtgtgtgc acgcactggg ctgggccaag cgactgagga
1741 ttcgcttggg aacgggcagg tggtagtagg ggcgccagct tgggctctcc tggcgccccg
1801 tagcatcgag tgtcttcttt gtcttctttc tctcctcacc caactccctt tgcctctccc
1861 caaaccgggc cgccaggatc cctccccgcg gcggcgatgg cccgagccat gagagtgagg
1921 actttccgcg cccattggtg acccttccag gcagacagcc tcagcaacgc ccctggtgga
1981 caggatggtt cggcaaagca gcctgagtta tttttgtgga cggaatcgga acacgctggc
2041 tccatatcgt gaaattttta ttaatttttt tctttttcct ttgttacttc tttatctttt
2101 cctttcttca gactccgtcc aaggagatgc tctccccggt cttctgctgc aatttagatt
2161 cctttccctt ctctccagtt ctccttccct taccaaggag aggggagcaa atggttttgg
2221 gcaagggctt tggccattca tgtcaagctg gttgtgggtt tttcaaggtg ccatagccac
2281 ccccaaatat gtttgtttaa agcgtggggt tttttaatct ctgccaccct tgtcaaggga
2341 gtcttgtaaa gttgccgagg gtaggttcat ctccaggttt cgggattccc atccgtcctg
2401 gcgatcctgc cagcagtggg tgggcagcct gagctccctc gggctcgcct gccagcctgg
2461 agttcttcct gtgctccttg atcacctgag ctgcctcaga ttccatttgg tcctctcctt
2521 cctggaaggc ttccttttat gttttgtttt aatcccaaat gtctgaatgt tttgcagtgt
2581 gtaggggttt gagccccttg ttcattctcc ttcctttttc ctcccgcttc cctctccatg
2641 aagtgattct gttgacaata atgtatactg cgcgttctct tcactggttt atctgcagaa
2701 atttctctgg gcttttttcg gtgttagatt caacactgcg ctaaagcggg gatgttccat
2761 tgaataaaag agcagtgtgg ttttcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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