LOCUS BC011593 792 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens general transcription factor IIIC, polypeptide 6,
alpha 35kDa, mRNA (cDNA clone MGC:20479 IMAGE:4639268), complete
cds.
ACCESSION BC011593
VERSION BC011593.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 792)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 792)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50355976.
FEATURES Location/Qualifiers
source 1..792
/db_xref="H-InvDB:HIT000035314"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20479 IMAGE:4639268"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..792
/gene="GTF3C6"
/gene_synonym="bA397G5.3"
/gene_synonym="TFIIIC35"
/db_xref="GeneID:112495"
/db_xref="HGNC:HGNC:20872"
CDS 47..688
/gene="GTF3C6"
/gene_synonym="bA397G5.3"
/gene_synonym="TFIIIC35"
/codon_start=1
/product="general transcription factor IIIC, polypeptide
6, alpha 35kDa"
/protein_id="AAH11593.1"
/db_xref="GeneID:112495"
/db_xref="HGNC:HGNC:20872"
/translation="MAAAADERSPEDGEDEEEEEQLVLVELSGIIDSDFLSKCENKCK
VLGIDTERPILQVDSCVFAGEYEDTLGTCVIFEENVEHADTEGNNKTVLKYKCHTMKK
LSMTRTLLTEKKEGEENIGGVEWLQIKDNDFSYRPNMICNFLHENEDEEVVASAPDKS
LELEEEEIQMNDSSNLSCEQEKPMHLEIEDSGPLIDIPSETEGSVFMETQMLP"
BASE COUNT 278 a 127 c 202 g 185 t
ORIGIN
1 ccgggcgggc gtggccagtg actagaaggc gaggcgccgc gggaccatgg cggcggcggc
61 ggacgagcgg agtccagagg acggagaaga cgaggaagag gaggagcagt tggttctggt
121 ggaattatca ggaattattg attcagactt cctctcaaaa tgtgaaaata aatgcaaggt
181 tttgggcatt gacactgaga ggcccattct gcaagtggac agctgtgtct ttgctgggga
241 gtatgaagac actctaggga cctgtgttat atttgaagaa aatgttgaac atgctgatac
301 agaaggcaat aataaaacag tgctaaaata taaatgccat acaatgaaga agctcagcat
361 gacaagaact ctcctgacag agaagaagga aggagaagaa aacataggtg gggtggaatg
421 gctgcaaata aaggataatg atttctccta tcgacccaac atgatttgta actttctaca
481 tgaaaatgaa gacgaagaag tggtagcttc agccccagat aaatctttgg aattggaaga
541 ggaagagatt caaatgaacg acagttcaaa cctgagttgt gaacaggaga aaccaatgca
601 cttggaaata gaagattctg gtcctcttat tgatatacct tctgagacag aaggttctgt
661 ttttatggaa actcaaatgc tgccttagaa atcactccta gatgaaatgt ttctcataat
721 aacttgtcaa gaacttttta gagttgttac ataaaaataa ttgctgtgta aaaaaaaaaa
781 aaaaaaaaaa aa
//