LOCUS BC011575 1641 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 85, mRNA (cDNA clone
IMAGE:4639306), partial cds.
ACCESSION BC011575
VERSION BC011575.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1641)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1641)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307870.
FEATURES Location/Qualifiers
source 1..1641
/db_xref="H-InvDB:HIT000087663"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4639306"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1641
/gene="C1orf85"
/gene_synonym="MGC31963"
/gene_synonym="NCU-G1"
/gene_synonym="RP11-443G18.2"
/db_xref="GeneID:112770"
/db_xref="HGNC:HGNC:29436"
CDS <1..1248
/gene="C1orf85"
/gene_synonym="MGC31963"
/gene_synonym="NCU-G1"
/gene_synonym="RP11-443G18.2"
/codon_start=1
/product="C1orf85 protein"
/protein_id="AAH11575.1"
/db_xref="GeneID:112770"
/db_xref="HGNC:HGNC:29436"
/translation="LFRRLNCGRMRGSVECTWGWGHCAPSPLLLWTLLLFAAPFGLLG
EKTRQVSLEVIPNWLGPLQNLLHIRAVGTNSTLHYVWSSLGPLAVVMVATNTPHSTLS
VNWSLLLSPEPDGGLMVLPKDSIQFSSALVFTRLLEFDSTNVSDTAAKPLGRPYPPYS
LADFSWNNITDSLDPATLSATFQGHPMNDPTRTFANGSLAFRVQAFSRSSRPAQPPRL
LHTADTCQLEVALIGASPRGNRSLFGLEVATLGQGPDCPSMQEQHSIDDEYAPAVFQL
DQLLWGSLPSGFAQWRPVAYSQKPGGRESALPCQASPLHPALAYSLPQSPIVRAFFGS
QNNFCAFNLTFGASTGPGYWDQHYLSWSMLLGVGFPPVDGLSPLVLGIMAVALGAPGL
MLLGGGLVLLLHHKKYSEYQSIN"
BASE COUNT 325 a 507 c 426 g 383 t
ORIGIN
1 ctcttccgtc ggctgaattg cggccgtatg cgcggctctg tggagtgcac ctggggttgg
61 gggcactgtg cccccagccc cctgctcctt tggactctac ttctgtttgc agccccattt
121 ggcctgctgg gggagaagac ccgccaggtg tctctggagg tcatccctaa ctggctgggc
181 cccctgcaga acctgcttca tatacgggca gtgggcacca attccacact gcactatgtg
241 tggagcagcc tggggcctct ggcagtggta atggtggcca ccaacacccc ccacagcacc
301 ctgagcgtca actggagcct cctgctatcc cctgagcccg atgggggcct gatggtgctc
361 cctaaggaca gcattcagtt ttcttctgcc cttgttttta ccaggctgct tgagtttgac
421 agcaccaacg tgtccgatac ggcagcaaag cctttgggaa gaccatatcc tccatactcc
481 ttggccgatt tctcttggaa caacatcact gattcattgg atcctgccac cctgagtgcc
541 acatttcaag gccaccccat gaacgaccct accaggactt ttgccaatgg cagcctggcc
601 ttcagggtcc aggccttttc caggtccagc cgaccagccc aaccccctcg cctcctgcac
661 acagcagaca cctgtcagct agaggtggcc ctgattggag cctctccccg gggaaaccgt
721 tccctgtttg ggctggaggt agccacattg ggccagggcc ctgactgccc ctcaatgcag
781 gagcagcact ccatcgacga tgaatatgca ccggccgtct tccagttgga ccagctactg
841 tggggctccc tcccatcagg ctttgcacag tggcgaccag tggcttactc ccagaagccg
901 gggggccgag aatcagccct gccctgccaa gcttcccctc ttcatcctgc cttagcatac
961 tctcttcccc agtcacccat tgtccgagcc ttctttgggt cccagaataa cttctgtgcc
1021 ttcaatctga cgttcggggc ttccacaggc cctggctatt gggaccaaca ctacctcagc
1081 tggtcgatgc tcctgggtgt gggcttccct ccagtggacg gcttgtcccc actagtcctg
1141 ggcatcatgg cagtggccct gggtgcccca gggctcatgc tgctaggggg cggcttggtt
1201 ctgctgctgc accacaagaa gtactcagag taccagtcca taaattaagg cccgctctct
1261 ggagggaagg acattactga acctgtcttg ctgtgcctcg aaactctgga ggttggagca
1321 tcaagttcca gccggcccct tcactccccc atcttgcttt tctgtggaac ctcagaggcc
1381 agcctcgact tcctggagac ccccaggtgg ggcttccttc atactttgtt gggggacttt
1441 ggaggcgggc aggggacagg gctattgata aggtcccctt ggtgttgcct tcttgcatct
1501 ccacacattt cccttggatg ggacttgcag gcctaaatga gaggcattct gactggttgg
1561 ctgccctgga aggcaagaaa atagatttat tttttttcac agggaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa a
//