LOCUS BC011523 1863 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens splicing factor 3a, subunit 3, 60kDa, mRNA (cDNA clone
MGC:17701 IMAGE:3867442), complete cds.
ACCESSION BC011523
VERSION BC011523.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1863)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1863)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: g Column: 7.
FEATURES Location/Qualifiers
source 1..1863
/db_xref="H-InvDB:HIT000035268"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17701 IMAGE:3867442"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1863
/gene="SF3A3"
/gene_synonym="PRP9"
/gene_synonym="PRPF9"
/gene_synonym="SAP61"
/gene_synonym="SF3a60"
/db_xref="GeneID:10946"
/db_xref="HGNC:HGNC:10767"
/db_xref="MIM:605596"
CDS 103..1608
/gene="SF3A3"
/gene_synonym="PRP9"
/gene_synonym="PRPF9"
/gene_synonym="SAP61"
/gene_synonym="SF3a60"
/codon_start=1
/product="splicing factor 3a, subunit 3, 60kDa"
/protein_id="AAH11523.1"
/db_xref="GeneID:10946"
/db_xref="HGNC:HGNC:10767"
/db_xref="MIM:605596"
/translation="METILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTR
AMQDRYMEVSGNLRDLYDDKDGLRKEELNAISGPNEFAEFYNRLKQIKEFHRKHPNEI
CVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDY
ITYLSIFDQLFDIPKERKNAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQAEFE
KKWENGTFPGWPKETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGG
TLEERAQRLFSTKGKSLESLDTSLFAKNPKSKGTKRDTERNKDIAFLEAQIYEYVEIL
GEQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPI
PYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVT
QIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL"
BASE COUNT 573 a 381 c 478 g 431 t
ORIGIN
1 gtgcagcctg atgcgcaacg tggggactca ggcgcgctgg gcggcaggag ttgcttccgg
61 ccgtgttggt ggtctgaatt gagaagccgc gactaaggga agatggagac aatactggag
121 cagcagcggc gctatcatga ggagaaggaa cggctcatgg acgtcatggc taaagagatg
181 ctcaccaaga agtccacgct ccgggaccag atcaattctg atcaccgcac tcgggccatg
241 caagataggt atatggaggt cagtgggaac ctgagggatt tgtatgatga taaggatgga
301 ttacgaaagg aggagctcaa tgccatttca ggacccaatg agtttgctga attctataat
361 agactcaagc aaataaagga attccaccgg aagcacccaa atgagatctg tgtgccaatg
421 tcagtggaat ttgaggaact cctgaaggct cgagagaatc caagtgaaga ggcacaaaac
481 ttggtggagt tcacagatga ggagggatat ggtcgttatc tcgatctcca tgactgttac
541 ctcaagtaca ttaacctgaa ggcatctgag aagctggatt atatcacata cctgtccatc
601 tttgaccaat tatttgacat tcctaaagaa aggaagaatg cagagtataa gagataccta
661 gagatgctgc ttgagtacct tcaggattac acagatagag tgaagcctct ccaagatcag
721 aatgaacttt ttgggaagat tcaggctgag tttgagaaga aatgggagaa tgggaccttt
781 cctggatggc cgaaagagac aagcagtgcc ctgacccatg ctggagccca tcttgacctc
841 tctgcattct cctcctggga ggagttggct tctctgggtt tggacagatt gaaatctgct
901 ctcttagctt taggcttgaa atgtggcggg accctagaag agcgagccca gagactattc
961 agtaccaaag gaaagtccct ggagtcactt gatacctctt tgtttgccaa aaatcccaag
1021 tcaaagggca ccaagcgaga cactgaaagg aacaaagaca ttgcttttct agaagcccag
1081 atctatgaat atgtagagat tctcggggaa cagcgacatc tcactcatga aaatgtacag
1141 cgcaagcaag ccaggacagg agaagagcga gaagaagagg aagaagagca gatcagtgag
1201 agtgagagtg aagatgaaga gaacgagatc atttacaacc ccaaaaacct gccacttggc
1261 tgggatggca aacctattcc ctactggctg tataagcttc atggcctaaa tatcaactac
1321 aactgtgaga tttgtggaaa ctacacctac cgagggccca aagccttcca gcgacacttt
1381 gctgaatggc gtcatgctca tggcatgagg tgtttgggca tcccaaacac tgctcacttt
1441 gctaatgtga cacagattga agatgctgtc tccttgtggg ccaaactgaa attgcagaag
1501 gcttcagaac gatggcagcc tgacactgag gaagaatatg aagactcaag tgggaatgtt
1561 gtgaataaga agacatacga ggatctgaaa agacaaggac tgctctagtg ttgagggatg
1621 tagctcagct tttgggctag cccaggcttc cctaagatct gctttttcta tttctcccaa
1681 ccaaatcctc ttaaagaccc tttgctatgt agtctcatgg tctagcatgc atcttgtaga
1741 aacaaggcat gctggcagat tgcagggttg agatgtgttt tatctgtttt atattttaaa
1801 agattctgcc agaaaataaa accagacctt gttctaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaa
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