LOCUS BC011451 3298 bp mRNA linear HUM 23-JUN-2006
DEFINITION Homo sapiens alanyl-tRNA synthetase, mRNA (cDNA clone MGC:9334
IMAGE:3450606), complete cds.
ACCESSION BC011451
VERSION BC011451.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3298)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3298)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4501840.
FEATURES Location/Qualifiers
source 1..3298
/db_xref="H-InvDB:HIT000035254"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9334 IMAGE:3450606"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3298
/gene="AARS"
/db_xref="GeneID:16"
/db_xref="HGNC:HGNC:20"
/db_xref="MIM:601065"
CDS 43..2949
/gene="AARS"
/codon_start=1
/product="alanyl-tRNA synthetase"
/protein_id="AAH11451.1"
/db_xref="GeneID:16"
/db_xref="HGNC:HGNC:20"
/db_xref="MIM:601065"
/translation="MDSTLTASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANA
GMNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLG
SWSFGDYFKELACKMALELLTQEFGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLG
LDDTKILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLV
FIQYNREADGILKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGA
RPYTGKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRY
AHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRI
LDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQL
KSQGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYHLDSSGSYVFENTVATVMA
LRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNA
QVRGGYVLHIGTIYGDLKVGDQVWLFIDEPRRRPIMSNHTATHILNFALRSVLGEADQ
KGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAIQGL
RAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIV
TEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLSVMEAKVKAQTAPNKDVQREIADL
GEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQFIDSNPNQP
LVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKITCLCQVPQNAANRGL
KASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQLATSFAQLRLGDVKN"
BASE COUNT 834 a 809 c 934 g 721 t
ORIGIN
1 gggacggcga ccctaggaga gttctttggg gtgactttca agatggactc tactctaaca
61 gcaagtgaaa tccggcagcg atttatagat ttcttcaaga ggaacgagca tacgtatgtt
121 cactcgtctg ccaccatccc attggatgac cccactttgc tctttgccaa tgcaggcatg
181 aaccagttta aacccatttt cctgaacaca attgacccat ctcaccccat ggcaaagctg
241 agcagagctg ccaataccca gaagtgcatc cgggctgggg gcaaacataa tgacctggac
301 gatgtgggca aggatgtcta tcatcacacc ttcttcgaga tgctgggctc ttggtctttt
361 ggagattact ttaaggaatt ggcatgtaag atggctctgg aactcctcac ccaagagttt
421 ggcattccca ttgaaagact ttatgttact tactttggcg gggatgaagc agctggctta
481 gaagcagatc tggaatgcaa acagatctgg caaaatttgg ggctggatga caccaaaatc
541 ctcccaggca acatgaagga taacttctgg gagatgggtg acacgggccc ctgtggtcct
601 tgcagtgaga tccactacga ccggattggt ggtcgggacg ccgcacatct tgtcaaccag
661 gacgacccta atgtgctgga gatctggaac cttgtgttca tccagtataa cagggaagct
721 gatggcattc tgaaacctct tcccaagaaa agcattgaca cagggatggg cctggaacga
781 ctggtatctg tgctgcagaa taagatgtcc aactatgaca ctgacctttt tgtcccttac
841 tttgaagcca ttcagaaggg cacaggtgcc cgaccataca ctgggaaagt tggtgctgag
901 gatgccgatg ggattgacat ggcctaccgg gtgctggctg accatgctcg gaccatcact
961 gtggcactgg ctgatggtgg ccggcctgac aacacagggc gtggatatgt gttgagacgg
1021 attctccgcc gagctgtccg atacgcccat gaaaagctca atgccagcag gggcttcttt
1081 gctacgttag tggatgttgt cgtccagtcc ctgggagatg catttcctga gctgaagaag
1141 gacccagaca tggtgaagga catcattaat gaagaagagg tgcagtttct caagactctc
1201 agcagagggc gtcgcatcct ggacaggaaa attcagagcc tgggagacag caagaccatt
1261 cccggagaca ctgcttggct cctctatgac acctatgggt ttccagtgga tctgactgga
1321 ctgattgctg aagagaaggg cctggtggta gacatggatg gctttgaaga ggagaggaaa
1381 ctggcccagc tgaaatcaca gggcaaggga gctggtgggg aagacctcat tatgctggac
1441 atttacgcta tcgaagagct ccgggcacgg ggtctggagg tcacagatga ttccccaaag
1501 tacaattacc atttggactc cagtggtagc tatgtatttg agaacacagt ggctacggtg
1561 atggctctgc gcagggagaa gatgttcgtg gaagaggtgt ccacaggcca ggagtgtgga
1621 gtggtgctgg acaagacctg tttctatgct gagcaaggag gccagatcta tgacgaaggc
1681 tacctggtga aggtggatga cagcagtgaa gataaaacag agtttacagt gaagaatgct
1741 caggtccgag gagggtatgt gctacacatt ggaaccatct acggtgacct gaaagtgggg
1801 gatcaggtct ggctgtttat tgatgagccc cgacgaagac ccatcatgag caaccacaca
1861 gctacgcaca ttctgaactt cgccctgcgc tcagtgcttg gggaagctga ccagaaaggc
1921 tcattggttg ctcctgaccg cctcagattt gactttactg ccaagggagc catgtccacc
1981 caacagatca agaaggctga agagattgct aatgagatga ttgaggcagc caaggccgtc
2041 tatacccagg attgccccct ggcagcagcg aaagccatcc agggcctacg ggctgtgttt
2101 gatgagacct atcctgaccc tgtgcgagtc gtctccattg gggtcccggt gtccgagttg
2161 ctggatgacc cctctgggcc tgctggctcc ctgacttctg ttgagttctg tgggggaacg
2221 cacctgcgga actcgagtca tgcaggagct tttgtgatcg tgacggaaga agccattgcc
2281 aagggtatcc ggaggattgt ggctgtcaca ggtgccgagg cccagaaggc cctcaggaaa
2341 gcagagagct tgaagaaatg tctctctgtc atggaagcca aagtgaaggc tcagactgct
2401 ccaaacaagg atgtgcagag ggagatcgct gaccttggag aggccctggc cactgcagtc
2461 atcccccagt ggcagaagga tgaattgcgg gagactctca aatccctaaa gaaggtcatg
2521 gatgacttgg accgagccag caaagccgat gtccagaaac gagtgttaga gaagacgaag
2581 cagttcatcg acagcaaccc caaccagcct cttgtcatcc tggagatgga gagcggcgcc
2641 tcagccaagg ccctgaatga agccttgaag ctcttcaaga tgcactcccc tcagacttct
2701 gccatgctct tcacggtgga caatgaggct ggcaagatca cgtgcctgtg tcaagtcccc
2761 cagaatgcag ccaatcgggg cttaaaagcc agcgagtggg tgcagcaggt gtcaggcttg
2821 atggacggta aaggtggtgg caaggatgtg tctgcacagg ccacaggcaa gaacgttggc
2881 tgcctgcagg aggcgctgca gctggccact tccttcgccc agctgcgcct cggggatgta
2941 aagaactgag tggggaagga ggaggctccc actggatcca tccgtccagc caagagctct
3001 tcatctgcta caagaacatt tgaatcttgg gacctttaaa gagcccctcc taacccagca
3061 gtaactggaa cacacttggg agcagtccta tgtctcagtg ccccttaaat ttctgccctg
3121 agccctccac gtcagtgcca tcggtctaga accactaacc ccgcattgct gttgatcgtc
3181 acgctcgcat ctatagataa cggctctcca gacctgagct ttccgcgtca gcaagtagga
3241 atcgtttttg ctgcagagaa taaaaggacc acgtgcaata cttaaaaaaa aaaaaaaa
//