LOCUS BC011353 2315 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lipoprotein lipase, mRNA (cDNA clone MGC:17090
IMAGE:4177781), complete cds.
ACCESSION BC011353
VERSION BC011353.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2315)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2315)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: h Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557726.
FEATURES Location/Qualifiers
source 1..2315
/db_xref="H-InvDB:HIT000035213"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17090 IMAGE:4177781"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2315
/gene="LPL"
/db_xref="GeneID:4023"
/db_xref="HGNC:HGNC:6677"
/db_xref="MIM:238600"
CDS 62..1489
/gene="LPL"
/codon_start=1
/product="lipoprotein lipase"
/protein_id="AAH11353.1"
/db_xref="GeneID:4023"
/db_xref="HGNC:HGNC:6677"
/db_xref="MIM:238600"
/translation="MESKALLVLTLAVWLQSLTASRGGVAAADQRRDFIDIESKFALR
TPEDTAEDTCHLIPGVAESVATCHFNHSSKTFMVIHGWTVTGMYESWVPKLVAALYKR
EPDSNVIVVDWLSRAQEHYPVSAGYTKLVGQDVARFINWMEEEFNYPLDNVHLLGYSL
GAHAAGIAGSLTNKKVNRITGLDPAGPNFEYAEAPSRLSPDDADFVDVLHTFTRGSPG
RSIGIQKPVGHVDIYPNGGTFQPGCNIGEAIRVIAERGLGDVDQLVKCSHERSIHLFI
DSLLNEENPSKAYRCSSKEAFEKGLCLSCRKNRCNNLGYEISKVRAKRSSKMYLKTRS
QMPYKVFHYQVKIHFSGTESETHTNQAFEISLYGTVAESENIPFTLPEVSTNKTYSFL
IYTEVDIGELLMLKLKWKSDSYFSWSDWWSSPGFAIQKIRVKAGETQKKVIFCSREKV
SHLQKGKAPAVFVKCHDKSLNKKSG"
BASE COUNT 668 a 508 c 553 g 586 t
ORIGIN
1 gctcagccgg ctcatcagtc ggtccgcgcc ttgcagctcc tccagaggga cgcgccccga
61 gatggagagc aaagccctgc tcgtgctgac tctggccgtg tggctccaga gtctgaccgc
121 ctcccgcgga ggggtggccg ccgccgacca aagaagagat tttatcgaca tcgaaagtaa
181 atttgcccta aggacccctg aagacacagc tgaggacact tgccacctca ttcccggagt
241 agcagagtcc gtggctacct gtcatttcaa tcacagcagc aaaaccttca tggtgatcca
301 tggctggacg gtaacaggaa tgtatgagag ttgggtgcca aaacttgtgg ccgccctgta
361 caagagagaa ccagactcca atgtcattgt ggtggactgg ctgtcacggg ctcaggagca
421 ttacccagtg tccgcgggct acaccaaact ggtgggacag gatgtggccc ggtttatcaa
481 ctggatggag gaggagttta actaccctct ggacaatgtc catctcttgg gatacagcct
541 tggagcccat gctgctggca ttgcaggaag tctgaccaat aagaaagtca acagaattac
601 tggcctcgat ccagctggac ctaactttga gtatgcagaa gccccgagtc gtctttctcc
661 tgatgatgca gattttgtag acgtcttaca cacattcacc agagggtccc ctggtcgaag
721 cattggaatc cagaaaccag ttgggcatgt tgacatttac ccgaatggag gtacttttca
781 gccaggatgt aacattggag aagctatccg cgtgattgca gagagaggac ttggagatgt
841 ggaccagcta gtgaagtgct cccacgagcg ctccattcat ctcttcatcg actctctgtt
901 gaatgaagaa aatccaagta aggcctacag gtgcagttcc aaggaagcct ttgagaaagg
961 gctctgcttg agttgtagaa agaaccgctg caacaatctg ggctatgaga tcagtaaagt
1021 cagagccaaa agaagcagca aaatgtacct gaagactcgt tctcagatgc cctacaaagt
1081 cttccattac caagtaaaga ttcatttttc tgggactgag agtgaaaccc ataccaatca
1141 ggcctttgag atttctctgt atggcaccgt ggccgagagt gagaacatcc cattcactct
1201 gcctgaagtt tccacaaata agacctactc cttcctaatt tacacagagg tagatattgg
1261 agaactactc atgttgaagc tcaaatggaa gagtgattca tactttagct ggtcagactg
1321 gtggagcagt cccggcttcg ccattcagaa gatcagagta aaagcaggag agactcagaa
1381 aaaggtgatc ttctgttcta gggagaaagt gtctcatttg cagaaaggaa aggcacctgc
1441 ggtatttgtg aaatgccatg acaagtctct gaataagaag tcaggctgaa actgggcgaa
1501 tctacagaac aaagaacggc atgtgaattc tgtgaagaat gaagtggagg aagtaacttt
1561 tacaaaacat acccagtgtt tggggtgttt caaaagtgga ttttcctgaa tattaatccc
1621 agccctaccc ttgttagtta ttttaggaga cagtctcaag cactaaaaag tggctaattc
1681 aatttatggg gtatagtggc caaatagcac atcctccaac gttaaaagac agtggatcat
1741 gaaaagtgct gttttgtcct ttgagaaaga aataattgtt tgagcgcaga gtaaaataag
1801 gctccttcat gtggcgtatt gggccatagc ctataattgg ttagaacctc ctattttaat
1861 tggaattctg gatctttcgg actgaggcct tctcaaactt tactctaagt ctccaagaat
1921 acagaaaatg cttttccgcg gcacgaatca gactcatcta cacagcagta tgaatgatgt
1981 tttagaatga ttccctcttg ctattggaat gtggtccaga cgtcaaccag gaacatgtaa
2041 cttggagagg gacgaagaaa gggtctgata aacacagagg ttttaaacag tccctaccat
2101 tggcctgcat catgacaaag ttacaaattc aaggagatat aaaatctaga tcaattaatt
2161 cttaataggc tttatcgttt attgcttaat ccctctctcc cccttctttt ttgtctcaag
2221 attatattat aataatgttc tctgggtagg tgttgaaaat gagcctgtaa tcctcagctg
2281 acacataatt tgaatggtgc aaaaaaaaaa aaaaa
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