LOCUS BC011177 712 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens vascular endothelial growth factor A, mRNA (cDNA clone
IMAGE:4150451), partial cds.
ACCESSION BC011177
VERSION BC011177.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 712)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 712)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: i Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 71051577.
FEATURES Location/Qualifiers
source 1..712
/db_xref="H-InvDB:HIT000087603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4150451"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..>712
/gene="VEGFA"
/gene_synonym="VEGF-A"
/gene_synonym="VPF"
/db_xref="GeneID:7422"
/db_xref="HGNC:HGNC:12680"
/db_xref="MIM:192240"
CDS <1..>712
/gene="VEGFA"
/gene_synonym="VEGF-A"
/gene_synonym="VPF"
/codon_start=1
/product="VEGFA protein"
/protein_id="AAH11177.2"
/db_xref="GeneID:7422"
/db_xref="HGNC:HGNC:12680"
/db_xref="MIM:192240"
/translation="PSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALK
LFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRL
GARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSA
SRAGPGRASETMNFLLSWVHWSLALLLYLHHAKVSGRALLAPRAAASASPGWGRACER
ARGGSVPHAGPWEKKKKKK"
BASE COUNT 117 a 225 c 288 g 82 t
ORIGIN
1 cccagcccca gctaccacct cctccccggc cggcggcgga cagtggacgc ggcggcgagc
61 cgcgggcagg ggccggagcc cgcgcccgga ggcggggtgg agggggtcgg ggctcgcggc
121 gtcgcactga aacttttcgt ccaacttctg ggctgttctc gcttcggagg agccgtggtc
181 cgcgcggggg aagccgagcc gagcggagcc gcgagaagtg ctagctcggg ccgggaggag
241 ccgcagccgg aggaggggga ggaggaagaa gagaaggaag aggagagggg gccgcagtgg
301 cgactcggcg ctcggaagcc gggctcatgg acgggtgagg cggcggtgtg cgcagacagt
361 gctccagccg cgcgcgctcc ccaggccctg gcccgggcct cgggccgggg aggaagagta
421 gctcgccgag gcgccgagga gagcgggccg ccccacagcc cgagccggag agggagcgcg
481 agccgcgccg gccccggtcg ggcctccgaa accatgaact ttctgctgtc ttgggtgcat
541 tggagccttg ccttgctgct ctacctccac catgccaagg taagcggtcg tgccctgctg
601 gcgccgcggg ccgctgcgag cgcctctccc ggctggggac gtgcgtgcga gcgcgcgcgt
661 gggggctccg tgccccacgc gggtccatgg gaaaaaaaaa aaaaaaaaaa aa
//