LOCUS BC011006 940 bp mRNA linear HUM 13-SEP-2006
DEFINITION Homo sapiens chromosome 2 open reading frame 28, mRNA (cDNA clone
IMAGE:4103408), partial cds.
ACCESSION BC011006
VERSION BC011006.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 940)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 940)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47078298.
FEATURES Location/Qualifiers
source 1..940
/db_xref="H-InvDB:HIT000035161"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4103408"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..940
/gene="C2orf28"
/gene_synonym="APR--3"
/gene_synonym="APR-3"
/gene_synonym="APR3"
/gene_synonym="HSPC013"
/gene_synonym="p18"
/gene_synonym="PRO240"
/db_xref="GeneID:51374"
/db_xref="HGNC:HGNC:24090"
CDS <1..702
/gene="C2orf28"
/gene_synonym="APR--3"
/gene_synonym="APR-3"
/gene_synonym="APR3"
/gene_synonym="HSPC013"
/gene_synonym="p18"
/gene_synonym="PRO240"
/codon_start=1
/product="C2orf28 protein"
/protein_id="AAH11006.3"
/db_xref="GeneID:51374"
/db_xref="HGNC:HGNC:24090"
/translation="GERKMAPHGPGSLTTLVPWAAALLLALGVERALALPEICTQCPG
SVQNLSKVAFYCKTTRELMLHARCCLNQKGTILGLDLQNCSLEDPGPNFHQAHTTVII
DLQANPLKGDLANTFRGFTQLQTLILPQHVNCPGGINAWNTITSYIDNQICQGQKNLC
NNTGDPEMCPENGSCVPDGPGLLQCVCADGFHGYKCMRQGSFSLLMFFGILGATTLSV
SILLWATQRRKAKTS"
BASE COUNT 248 a 242 c 215 g 235 t
ORIGIN
1 ggggaacgga aaatggcgcc tcacggcccg ggtagtctta cgaccctggt gccctgggct
61 gccgccctgc tcctcgctct gggcgtggaa agggctctgg cgctacccga gatatgcacc
121 caatgtccag ggagcgtgca aaatttgtca aaagtggcct tttattgtaa aacgacacga
181 gagctaatgc tgcatgcccg ttgctgcctg aatcagaagg gcaccatctt ggggctggat
241 ctccagaact gttctctgga ggaccctggt ccaaactttc atcaggcaca taccactgtc
301 atcatagacc tgcaagcaaa ccccctcaaa ggtgacttgg ccaacacctt ccgtggcttt
361 actcagctcc agactctgat actgccacaa catgtcaact gtcctggagg aattaatgcc
421 tggaatacta tcacctctta tatagacaac caaatctgtc aagggcaaaa gaacctttgc
481 aataacactg gggacccaga aatgtgtcct gagaatggat cttgtgtacc tgatggtcca
541 ggtcttttgc agtgtgtttg tgctgatggt ttccatggat acaagtgtat gcgccagggc
601 tcgttctcac tgcttatgtt cttcgggatt ctgggagcca ccactctatc cgtctccatt
661 ctgctttggg cgacccagcg ccgaaaagcc aagacttcat gaactacata ggtcttacca
721 ttgacctaag atcaatctga actatcttag cccagtcagg gagctctgct tcctagaaag
781 gcatctttcg ccagtggatt cgcctcaagg ttgaggccgc cattggaaga tgaaaaattg
841 cactcccttg gtgtagacaa ataccagttc ccattggtgt tgttgcctat aataaacact
901 ttttcttttc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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