LOCUS BC011001 1465 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens galactosidase, beta 1-like 3, mRNA (cDNA clone
IMAGE:3938286), complete cds.
ACCESSION BC011001
VERSION BC011001.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1465)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1465)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011001.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: d Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147534
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1465
/db_xref="H-InvDB:HIT000050548"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3938286"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1465
/gene="GLB1L3"
/db_xref="GeneID:112937"
/db_xref="HGNC:HGNC:25147"
CDS 361..1302
/gene="GLB1L3"
/codon_start=1
/product="GLB1L3 protein"
/protein_id="AAH11001.2"
/db_xref="GeneID:112937"
/db_xref="HGNC:HGNC:25147"
/translation="MKSPPLLSPCLSWKRMAGIFFLPFISSGFAPRFKQEENFMLGRA
HPSQPRFNWSHLTPLELKNRSVGLGTESTGRGKPHFTLEGHKFLIFGGSIHYFRVPRE
YWRDRLLKLKACGFNTVTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILR
PGPYICSEMDLGGLPSWLLQDPRLLLRTTNKSFIEAVEKYFDHLIPRVIPLQYRQAGP
VIAVQVENEYGSFNKDKTYMPYLHKALLRRGIVELLLTSDGEKHVLSGHTKGVLAAIN
LQKLHQDTFNQLHKVQGASIDAGLLSDASQAATSSSL"
BASE COUNT 329 a 419 c 405 g 312 t
ORIGIN
1 ccctgtgcca gccggctgtc gacccaggtt aggaagcccg aggtcggggc gttaccccaa
61 gggccctccc gcttcccctc cgagggcaga gaggcgtccg cgcccggacg cactgcggga
121 acacctggag ccccggcgga gctcggctgt ccccgcggga gggagcccga cgcgcatcct
181 tgggacccgg acccggcgcc cgcgcctcgg gacggatttc tgcctcggct gcaggcgcag
241 cgcgcagacc tgagcctgcc ccgcggaacc ggggctcgag tcccggcccg agcgcggcgt
301 cggggccagc ggagaggggc ggaagccgca agggaccctc ggcgcctcgg cctggccgcg
361 atgaagtccc cgcccctcct cagcccgtgt ctctcctgga agagaatggc gggcatcttt
421 ttcctgccat ttatctcatc aggttttgct cctcggttta agcaggaaga gaacttcatg
481 cttggaagag cgcatccgtc ccagcctagg tttaattggt ctcatctgac ccctctggag
541 ctgaagaatc gatctgtggg acttggaact gaaagcacag gtcggggtaa gccccacttc
601 acactggagg gccacaagtt cctgatcttc gggggctcca tccactattt ccgggtgccc
661 agggagtact ggagggaccg cctgctgaag ctgaaggcct gtggcttcaa tactgtcacc
721 acctatgttc cgtggaacct gcatgagcca gaaagaggca aatttgactt ctctgggaac
781 ctggacctgg aggccttcgt cctgatggcc gcagagatcg ggctgtgggt gattctgcgt
841 ccaggcccct acatctgcag tgagatggac ctcgggggct tgcccagctg gctcctgcaa
901 gacccccggt tactgttgag gacaaccaac aagagcttca ttgaagcagt tgagaagtat
961 tttgaccacc tgattcccag agtgattcct ctccagtacc gccaggcagg ccctgtcatc
1021 gcggtgcaag tggagaatga gtatggctca ttcaataagg ataaaacata catgccgtat
1081 ctccacaagg ccctgctgag aagagggatt gtggagcttc tcttgacctc tgatggtgag
1141 aaacatgtgc tgagtggcca caccaaagga gtgttggccg ccatcaattt gcaaaaactt
1201 caccaggata ctttcaatca gcttcataaa gtccagggag ccagtataga tgcaggactg
1261 ctctcagatg cctcacaagc agcaacttct tcctccttat agttcttatc tgtgattctt
1321 ccataatttt gtccttctaa gcttctgatg cactgaatta tgtaaagtgc attcccttca
1381 ccagcttgtg caccctattc tgtaactgat aataaatggt tggtattgca aaaaaaaaaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaa
//