LOCUS BC010960 1878 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit
C1, mRNA (cDNA clone MGC:13646 IMAGE:4108687), complete cds.
ACCESSION BC010960
VERSION BC010960.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1878)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1878)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55956925.
FEATURES Location/Qualifiers
source 1..1878
/db_xref="H-InvDB:HIT000035148"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13646 IMAGE:4108687"
/tissue_type="Bone marrow, acute myelogenous leukemia"
/clone_lib="NIH_MGC_55"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1878
/gene="ATP6V1C1"
/gene_synonym="VATC"
/gene_synonym="Vma5"
/db_xref="GeneID:528"
/db_xref="HGNC:HGNC:856"
/db_xref="MIM:603097"
CDS 172..1320
/gene="ATP6V1C1"
/gene_synonym="VATC"
/gene_synonym="Vma5"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 42kDa, V1
subunit C1"
/protein_id="AAH10960.1"
/db_xref="GeneID:528"
/db_xref="HGNC:HGNC:856"
/db_xref="MIM:603097"
/translation="MTEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLK
VGTLDVLVGLSDELAKLDAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYI
TRFQWDMAKYPIKQSLKNISEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGS
LLTRSLAEIVKKDDFVLDSEYLVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSE
DQDSYLCNVTLFRKAVDDFRHKARENKFIVRDFQYNEEEMKADKEEMNRLSTDKKKQF
GPLVRWLKVNFSEAFIAWIHVKALRVFVESVLRYGLPVNFQAMLLQPNKKTLKKLREV
LHELYKHLDSSAAAIIDAPMDIPGLNLSQQEYYPYVYYKIDCNLLEFK"
BASE COUNT 603 a 326 c 402 g 547 t
ORIGIN
1 gggggggtag aggaagccgt gaggccggag cttaggtcgg gaagggatgg atcgctgagc
61 cgatagcgtc cgctaggctg tctgcctcgg tacctgttac tgctgctact tcctcgtttg
121 acaccttcct ggaatctctc ttgatttttg aggaaatacc tagtaacaaa catgactgag
181 ttctggctta tatctgctcc tggggagaaa acctgtcagc aaacatggga gaaattgcat
241 gcggcaactt caaagaacaa taatcttgct gtcacttcca agttcaatat tcctgactta
301 aaggttggca cgttggatgt cttggttggc ttgtcagatg aactggctaa actggatgca
361 tttgtagaag gagtggttaa gaaagtagct caatacatgg ctgatgtatt ggaagatagc
421 aaagacaaag ttcaagagaa tctgttggct aatggagtgg acttggttac ttatataaca
481 aggttccagt gggacatggc caaatatcca atcaagcagt ccctgaaaaa tatttctgaa
541 ataattgcca agggagtaac tcagattgat aatgacctga aatctcgagc atctgcatac
601 aataacctga aaggaaatct tcagaatttg gaacgaaaga atgcaggaag tttgctaact
661 agaagtctag cagaaattgt gaagaaggat gactttgttc ttgattcaga gtatctcgtc
721 acattactgg tagtagttcc caagttaaac cacaacgact ggattaagca gtatgaaaca
781 ctagccgaaa tggtagttcc aaggtctagc aatgttcttt cagaggacca agacagttac
841 ctgtgtaatg tcaccttgtt taggaaggca gttgatgact tcagacacaa agccagagaa
901 aacaaattca ttgttcgtga cttccagtat aatgaagagg agatgaaagc agataaagaa
961 gaaatgaaca ggctttctac tgataagaaa aaacaatttg gaccacttgt acggtggctg
1021 aaagtgaatt ttagtgaagc atttattgca tggattcacg tgaaagcatt acgggttttc
1081 gttgagtctg ttttaaggta tggcttgcca gtgaacttcc aagcaatgct acttcagccc
1141 aataagaaaa ctttgaagaa actgagagaa gtattacatg aattgtataa acatctagac
1201 agcagtgcag cagctattat tgatgctcct atggatattc caggtttaaa cctgagtcaa
1261 caagaatact acccctatgt gtactacaag attgattgca acttgctgga attcaagtga
1321 aaatgggctc ctcccccgac aatcctgtcc ttgtgtttgt gtgtgctaac agaaataagt
1381 tgcagtatgg tcgtactttt aactctagta tcctttgctt gcttcttacc ccctttccta
1441 ggtgaattct cccacagtgg tctgtatctc aacattttct ttttaaagga aaaaatatat
1501 atatatagtt tctttttatt gatcaggtct gtaaatgtgt actaaaaaaa tcagagttta
1561 tttataaaca aaatagttta tttaaagaga aggtctcttc cttattgata tcatggtatg
1621 cattaattcc atttgttact attgtgcaca aaagccctgt tcacagggga atggtgtaaa
1681 catttatact gttttgttca ctgtatttag tagacataac tgttgaatag ttactgaatc
1741 atgatgtaaa gaatatgtga ccatcttcag gtatgggatt tctgaacgtt tcaaatttca
1801 atcaatgagc actgtcaaca cccacaggag agaataaaat tacctgtgca aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaa
//