LOCUS BC010923 1326 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens ALX homeobox 1, mRNA (cDNA clone MGC:13497
IMAGE:4278460), complete cds.
ACCESSION BC010923
VERSION BC010923.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1326)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1326)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: k Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5901917.
FEATURES Location/Qualifiers
source 1..1326
/db_xref="H-InvDB:HIT000035122"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13497 IMAGE:4278460"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1326
/gene="ALX1"
/db_xref="GeneID:8092"
/db_xref="HGNC:HGNC:1494"
/db_xref="MIM:601527"
CDS 11..991
/gene="ALX1"
/codon_start=1
/product="ALX homeobox 1"
/protein_id="AAH10923.1"
/db_xref="GeneID:8092"
/db_xref="HGNC:HGNC:1494"
/db_xref="MIM:601527"
/translation="MEFLSEKFALKSPPSKNSDFYMGAGGPLEHVMETLDNESFYSKA
SAGKCVQAFGPLPRAEHHVRLERTSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSL
RMSPVKGMQEKGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY
VREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSY
PQIQNNLWAGNASGGSVVTSCMLPRDTSSCMTPYSHSPRTDSSYTGFSNHQNQFSHVP
LNNFFTDSLLTGATNGHAFETKPEFERRSSSIAVLRMKAKEHTANISWAM"
BASE COUNT 417 a 284 c 299 g 326 t
ORIGIN
1 ggggaggatt atggagtttc tgagcgagaa gtttgccctc aagagccctc cgagtaaaaa
61 cagtgacttt tacatgggcg caggaggtcc tctggagcac gttatggaga cgctggacaa
121 tgagtccttt tacagcaaag cgtctgcagg caaatgcgtg caggccttcg gacccctgcc
181 ccgcgccgag catcacgtgc gcttggagag gacctcgccc tgtcaggaca gcagcgtgaa
241 ctatgggatc actaaagtag aaggacagcc ccttcacacc gaactgaata gagctatgga
301 caactgtaac agtctccgaa tgtctcccgt gaaagggatg caagagaagg gagagctgga
361 tgaacttggg gataaatgtg atagcaatgt atccagcagt aagaaacgga ggcaccgaac
421 caccttcacc agtttgcagc tagaggagct ggagaaagtc tttcagaaaa ctcattaccc
481 ggatgtgtat gtcagagaac agcttgctct gaggacagag ctcactgagg ccagggtcca
541 ggtttggttt caaaatcgaa gggccaaatg gagaaaaagg gaacgttatg gccaaataca
601 acaagcgaaa agccattttg ctgccaccta tgatatatca gttttgccaa ggactgacag
661 ctacccacag attcagaaca atttgtgggc aggaaatgca agtggtggtt ctgtggttac
721 ttcatgcatg ttaccacgtg acacttcctc ctgtatgaca ccttattctc actcgcctcg
781 gacagattcc agttacacgg ggttttcaaa ccaccagaac cagttcagcc acgtgcccct
841 caacaatttt ttcactgact ctcttcttac tggggcaacc aatggacatg catttgaaac
901 aaagccagag tttgaaagga ggtcttccag tatcgcagtt cttcgaatga aagccaagga
961 gcacaccgcc aatatttcat gggccatgta acatacagta ctcttttatt tttcttttaa
1021 tagcaaagtt aaacattctt atttctcata tttaaaggat accacaataa gctgctgtgt
1081 gtggaattgc taaaggtcaa gatattcagt gagaccagct taaatgaata gttgttattt
1141 aacattaaaa tctaagaatg aacctctgaa aagactaaat aggtttacca tgtgccagtc
1201 tccacaaacc ctgttttagt agtaaggttt tctttttcta ttgtacaagt caatgaaata
1261 tgatcacgca acttattaaa gaataaatgt gttaaacaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaa
//